Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00971 ATGGGGTGTTGTGTCTCAACAAGCAATCAAAGTACTTGTAGTAGCAGGAGCAATGGAGAGACAGTCTCTTCATCCTGCCTAGAAGCTGGATTCTGTGGTCAAAAGAAAGCAAGGAGAACATTCTCTGATCATGTTATCTCACTGCACCAGTTACCATCCTTACCAAACAGGATTTTCACTAATGGAAAGAGCCGGTCTTCTTGCATATTTACACAGCAAGGTCGTAAGGGGATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGTCAGAAGATGTGATCTTCTGTGGTGTCTTTGATGGCCATGGTCCACAAGGTCACCTTGTCGCTCGCAAAGTCAGGGATGCCTTGCCAATAAAACTGCTTTCATTTTTGCATTCATGTGAATCAAGGCGAAATGGGTCAGGTAAAGCTTGTCTCAAAGGGGACATAAAGCCTGAAAATGGAGAGTCTGAGAAGGATTTATCTGCTGAGGATAAGCTAAACTCTATGTGGAGAGAAGCTTTCATGAAGGCGTATAAGGCTATGGACAAAGAGCTGAAGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTGTAGTGAAGCAGGGTTCAAATTTGTTCATGGGAAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTTGATGGTAGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCTGAAAGAATCAAACGGTGCAAGGGTAGGGTATTTGCACTGCAAGATGAGCCAGAAGTTCCTAGGGTTTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGTGACTTTTGCTTGAAGGAGTACGGTGTGATTTCTACACCTGAATTTTCTCACCGGCTGCTTACAGACAAAGATCAGTTCATTGTTCTTGCCTCGGATGGGGTGTGGGATGTTTTGAGCAATAAAGAGGTGGTGGAGATAGTATCTTCAGCACCAAGTCGATCATCAGCAGCCAGGGTTCTGGTGGATTCTGCTGCACGAGAGTGGAAACTTAAATATCCTACTTCAAAAATGGATGACTGTGCTGTTGTGTGCCTATTTTTGGATGGGAAAATGGACTTGGAATCTGATTGTGATGAGCAATGTTTTTCTTCTGCAACCATCCAGAGCAACCATTCAGGTAATCCAGTTGAGTCAGATGATGGTCAAAAGTCTGAGCCATCTTTGCAAAGGAACTTTACTGTGAGATCCTCAAAAGAAACTGAGAAGACCCATGGAGGAGGAGTATCTGTTGATGTTGTTGAAGATGGAACATCATCAGCTGAAGATCAAAACTGGTCAGGTTTGGAGGGTGTCACCCGAGTGAACTCATTAGTTCAACTTCCTAGATTTTCTGAGGAAAGGCCTAACTCTTGA 1422 0.4388 MGCCVSTSNQSTCSSRSNGETVSSSCLEAGFCGQKKARRTFSDHVISLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPQGHLVARKVRDALPIKLLSFLHSCESRRNGSGKACLKGDIKPENGESEKDLSAEDKLNSMWREAFMKAYKAMDKELKSHPNLDCFCSGSTAVTVVKQGSNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISTPEFSHRLLTDKDQFIVLASDGVWDVLSNKEVVEIVSSAPSRSSAARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDCDEQCFSSATIQSNHSGNPVESDDGQKSEPSLQRNFTVRSSKETEKTHGGGVSVDVVEDGTSSAEDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00971 473 CDD PP2Cc 65 370 IPR001932 -
Rops7g00971 473 MobiDBLite consensus disorder prediction 391 417 - -
Rops7g00971 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Rops7g00971 473 SMART PP2C_4 55 368 IPR001932 -
Rops7g00971 473 Pfam Protein phosphatase 2C 147 348 IPR001932 -
Rops7g00971 473 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Rops7g00971 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Rops7g00971 473 Gene3D - 57 372 IPR036457 -
Rops7g00971 473 MobiDBLite consensus disorder prediction 1 23 - -
Rops7g00971 473 MobiDBLite consensus disorder prediction 391 450 - -
Rops7g00971 473 PANTHER PROTEIN PHOSPHATASE 47 368 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00971 Rops-Chr7 12849317 12853383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00971 1 473 PP2C-type Phosphatase Gene Family AT1G03590 69.874 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00971 - - gmx:100798340 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00971 7 12849317 12853383 Rops7g00971 7 12849317 12853383 ECH
Rops7g00971 7 12849317 12853383 Rops3g01382 3 20431221 20434190 PCT