Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00963 ATGGATGAAGAGAGATCTGCTTCACAGTACAAGAGAGTGAAAATCCATGGACAAGTTCTATTAGCATTTATGTTGATCTGCACAGTCCAGTTTTCACTTGCAGACACTGTTCCTGCTGATGTGGCTGCAATTAATAGGTTATATACTGCATTGGGCAGTCCTGTTCTTCCTGGGTGGGTTTCTAGTGCGGGAGACCCGTGTGGACAAGGGTGGCAAGGAGTTCAATGTAATGGCTCAGTCATACAACAAATAATTCTGAGTGGTGCAAATTTGGGAGGAGAACTTGGTGATAGCTTGGGAGCATTTGTTTCTATCAGAGCAATAGTTCTAAGCAACAACCACATTGGGGGAAGTATTCCATCCAGTTTGCCAGTCACATTGCAAAACTTTTTTCTTTCAGGCAACCAGTTCACAGGAAGTATTCCAGACTCTCTATCCACATTGACTGAACTGACTGACATGTCACTTAATGACAATCATTTAACTGGAGAAATACCAGATGCCTTTCAGTCTCTTACGCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTCTGGAGAATTTATCAGCTCTGACCACCTTACATTTACAGAACAATGGACTCTCCGGGACCCTTGATGTCTTACAAGACCTTCCACTGAAGGATTTGAATGTTGAGAACAACCAGTTTGCTGGACCAATACCTCAAAAGTTGTTAAGCATCCCTAACTTCAGAAAAGATGGAAACCCGTTTAATCTTGTTGGCAATGCTACTATAGCTCCAGCTTATGCACCTCTTTCTCCAGTGACAGCACCACCATCAGGAACTGTGGTTTCTGGTACTCCATCTTCTGGACGTGTACCTCCTAAACAAGCTGATGGACCAACTGCAGCAAAGGAATCAAAATCTGGGAAATCGAAAACAACCACCAAAAGGGTGGTTTGGATATCTATTTCTGGTATATTGGTGTTTATTGTTTTGGTACTGGCACTTGTTCTCTTTATTCCAAGATGTAGCAGAAGGGAACGGGTTGACAGAACCTCCAAGCAACATCAAATTGGTGCACATGGGGGTGAAAGACAGAATCCTAGGAGTAATGGGGATTTATTCCAACCACCTAGTAAAACTGAAAAAGTATCAAAAGGGGCTGTTGTGAGGCCAAAAGAGGATCATCAAGCAGAGAAAGATGAGCAAAGAATGGGAACAATACCAAAGCTGTTAGAACATGAGATAGATATGAGTTCAATAGACGAATTTTCAATGCCTTCTCCACCCCCACCTCCTCCACTTCCTACTGAGAGGGTGATTGTTGAGCCAACCACATTCCACAGAGGGGCTAACAACAATCCTTCCAAAAAAAGTCCAGTACCTCCCACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAATATACAAATAGCTTTTCTCAAGACCATCTTATAGGATTAGGCATGCTGGGGACTGTGTATAGGGCAGAACTTCCTGATGGGAAGATACTTGCTGTGAAGAAACTGGACAAGAGAGTTTCTGAGAACCTAAAGGATGACGAGTTTCTTGAATTGGTAAACAATATTGATAGAATCCGGCATGCAAATATTGTTGAGCTTATTGGGTACTGTGCAGAGCATGGTCAAAGGCTTATGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCACTCCATTCAGATGATGAATTCAAGACAAGACTTTCATGGAGTGCTCGCATTCGGATAGCACTTGGGACAGCTAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTGTCCACAGAAATTTCAAGTCTGCCAACATTCTCCTTGATGATGATTTATCCATGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAGAGTGATGTGTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAAGAAACGCCCTAGAGGGGAGCAGTTTCTAGTGAGATGGGCAATTCCTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATGGAAATTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCTGAGCCAGAATTTAGGCCAGCAATGTCAGAGGCCTCGAATTCCATGAGCAACTTCGAAACCAACCCCTTCGCTGCCGAAGAAGAGGTTAATCCTTTCGCCGACGGAGCTAAAGGGAAAGCATCAGGGAAATCAAATTATGGTGGAGGTGCATTCTACACTACTAACCCAGGAAGTGTTGCCTCTGCAACCTCGAAGCTCTCACCCCTTCCTCCTGAGCCTTATGATCGTGGGGCAACTGTTGACATTCCTCTTGATTCTGAAACGGACTTCAAAGCAAAGGAGAAGGAGCTTCAAGCTAGAGAGGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAACGAAAGGAAGATGCTATATCACAAGCTGGAATAATTATAGAGGACAAAAATTGGCCACCTGTTTTCCCTATCATTCATCATGACATTGCAACTGAAATACCAATACATCTTCAAAGGATCCAGTATGTTGCGTTTACAACATGGTTGGGTTTAATTTTCTGTCTTTTATGGAATGTTGTGGCTGTTACAGCAGCTTGGATCAACGGAGAAGGTCCGTCAGTATGGTTTCTTTCTATCATATACTTTATTTCCGGTGCTCCAGGATCCTATGTGATGTGGTATCGCCCTCTTTATCGCGCTACGAGGACGGACAGTGCTATAAAGTTTGGCTTGTTTTTCTTGTGTTACATGTTGCACATTTGCTTTTGCGTTTTTGCTGCAATTGCTCCTCCAATTATCTTCAAAGGAAAATCTCTCACAGGTATTCTGCCTGCGTTTGAGGTGATGACCTACAATGCATTGGTTGGGGTATTCTACTTTATTGGGTTTGGTTTATTCGCCCTTGAATCACTGCTAAGCATCTGGGTTATTCAGCAAGTATACATGTACTTCCGCGGCAGTGGAAAAGCTGCAGAGATGAAGCGTGAGGCTGCGAGGGGGGCCATGATGAGTGCTCTATGA 3165 0.4294 MDEERSASQYKRVKIHGQVLLAFMLICTVQFSLADTVPADVAAINRLYTALGSPVLPGWVSSAGDPCGQGWQGVQCNGSVIQQIILSGANLGGELGDSLGAFVSIRAIVLSNNHIGGSIPSSLPVTLQNFFLSGNQFTGSIPDSLSTLTELTDMSLNDNHLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSLENLSALTTLHLQNNGLSGTLDVLQDLPLKDLNVENNQFAGPIPQKLLSIPNFRKDGNPFNLVGNATIAPAYAPLSPVTAPPSGTVVSGTPSSGRVPPKQADGPTAAKESKSGKSKTTTKRVVWISISGILVFIVLVLALVLFIPRCSRRERVDRTSKQHQIGAHGGERQNPRSNGDLFQPPSKTEKVSKGAVVRPKEDHQAEKDEQRMGTIPKLLEHEIDMSSIDEFSMPSPPPPPPLPTERVIVEPTTFHRGANNNPSKKSPVPPTFAKSFTIASLQQYTNSFSQDHLIGLGMLGTVYRAELPDGKILAVKKLDKRVSENLKDDEFLELVNNIDRIRHANIVELIGYCAEHGQRLMIYEYCSNGSLQDALHSDDEFKTRLSWSARIRIALGTARALEYLHEQCQPPVVHRNFKSANILLDDDLSMRVSDCGLAPLITKGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDKKRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNGNYPAKSLSNFADIISRCVQSEPEFRPAMSEASNSMSNFETNPFAAEEEVNPFADGAKGKASGKSNYGGGAFYTTNPGSVASATSKLSPLPPEPYDRGATVDIPLDSETDFKAKEKELQAREAELKRREQELKRKEDAISQAGIIIEDKNWPPVFPIIHHDIATEIPIHLQRIQYVAFTTWLGLIFCLLWNVVAVTAAWINGEGPSVWFLSIIYFISGAPGSYVMWYRPLYRATRTDSAIKFGLFFLCYMLHICFCVFAAIAPPIIFKGKSLTGILPAFEVMTYNALVGVFYFIGFGLFALESLLSIWVIQQVYMYFRGSGKAAEMKREAARGAMMSAL* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00963 1054 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 555 763 - -
Rops7g00963 1054 ProSiteProfiles Protein kinase domain profile. 477 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00963 1054 Coils Coil 826 853 - -
Rops7g00963 1054 Gene3D Ribonuclease Inhibitor 38 259 IPR032675 -
Rops7g00963 1054 MobiDBLite consensus disorder prediction 343 404 - -
Rops7g00963 1054 Gene3D Phosphorylase Kinase; domain 1 442 554 - -
Rops7g00963 1054 Pfam Protein tyrosine and serine/threonine kinase 480 748 IPR001245 GO:0004672|GO:0006468
Rops7g00963 1054 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 263 - -
Rops7g00963 1054 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Rops7g00963 1054 SUPERFAMILY Protein kinase-like (PK-like) 451 749 IPR011009 -
Rops7g00963 1054 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 443 554 - -
Rops7g00963 1054 MobiDBLite consensus disorder prediction 275 307 - -
Rops7g00963 1054 Gene3D Transferase(Phosphotransferase) domain 1 555 762 - -
Rops7g00963 1054 SUPERFAMILY L domain-like 38 244 - -
Rops7g00963 1054 MobiDBLite consensus disorder prediction 382 404 - -
Rops7g00963 1054 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 751 - -
Rops7g00963 1054 Pfam SCAMP family 864 1034 IPR007273 GO:0015031|GO:0016020
Rops7g00963 1054 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00963 Rops-Chr7 12728198 12736023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00963 31 746 Strubbelig Receptor Gene Family AT4G03390 62.382 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops7g00963 PK_Tyr_Ser-Thr 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00963 - - gmx:100811490 1218.37