Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00927 ATGGTGGCAGTGAAGGTCATAGAGCAGTGTGAAGTTGCACCACCTCAAGGTTCACTTCCCTCAACCACACTTCCCCTCACTTTCTTTGACCTTCCATGGTTTTACTGTCCTCCTATCCAACGTATCTTCTTCTACGAGTCTCCCCATTCAACACACCACTTCCTCAAAGCAGCACTTCCCACTCTGAAGCACTCTCTTTCCCTCATTCTCCAACACTTCTTCCCCTTTGCCGCCAATCTCATCGTCCCTCCACACTTTCCCCACCACGCCCCTTACATCCGTTACCTTGATGGTGATTCTCTCTCTTTCACCATTGCTGAGTCCACTGCTGACTTCGACATCCTCGTATCTGATTCCCCACAAGACGCTCAAAATTGGCACCCCCTTGTTCCTACGTTGCCGTCACCTCGTACAGAGGATGATGGGACACGTGTCATCCCTCTCATGGCGATTCAGGTCACGATTCTACCAAACTCTGGATTCAGCATCTGCCTTACGTTCCACCACCTTGCTGCGGATGGGAAATCACTTCACCATTTCATGAAGTATTGGGCCTCTGTTTGCAAGGCAAAAACAAGGGGTTTGGCTTCCCTTGAAGGTTCAACGTCGAAAAGCATGAAGTTTCCACGGCTGGTGCGAGATGTTCCCATTAACAAGGTACGCGCTACTCTTGTATCGAGTCGTGAAAAAGTTGAGAAACTTGAGAAATGGATCTCTCTTAAATGCGCCAGCTACGCTTCAGGGACACTACACTTGTCAACCTTTGTGGTAACATGTTCCTTGATTTGGGTTTGTATGATAAAATCAGAGCAAAGCCAAGGTAATTGTGTTGTAAAAGGATGTGATGAACTTTGCTACTTTGTCTTCCAAGCAGATTGTCGGGAACATCCCGAGTTTTCATTGCCTTTAAGTTACTTCGGGAATTGTCTAGCCACTGGCATTGTGGCAATCAACAGGGGTGAGCTATTGGGAGAAAATGGGATAGTTGAGGCAGCAAATGCTATTGAAAGAAAAGTTAGAGATTTGAAGAGTGACGCTTTATTAAATTCTGAAACATTAATGTCAGATTATAGAGAATTATCGAAACCAGGTCAATCTGTGCTAACAGTTGCAGGGTCACCAAAACGGCCGTGTATGAGACTGATTTTGGGTGGGGAAAGCCTAAGAAGTCTGAAGCAGTACATGTTGATTCATCAGGATCAATTTCTCTCTCTGATTGTAGAGAAGAAGGAGGTGGAATTGAGATTGGATTGGCACTTGAAAGGATCCGAATGA 1275 0.4573 MVAVKVIEQCEVAPPQGSLPSTTLPLTFFDLPWFYCPPIQRIFFYESPHSTHHFLKAALPTLKHSLSLILQHFFPFAANLIVPPHFPHHAPYIRYLDGDSLSFTIAESTADFDILVSDSPQDAQNWHPLVPTLPSPRTEDDGTRVIPLMAIQVTILPNSGFSICLTFHHLAADGKSLHHFMKYWASVCKAKTRGLASLEGSTSKSMKFPRLVRDVPINKVRATLVSSREKVEKLEKWISLKCASYASGTLHLSTFVVTCSLIWVCMIKSEQSQGNCVVKGCDELCYFVFQADCREHPEFSLPLSYFGNCLATGIVAINRGELLGENGIVEAANAIERKVRDLKSDALLNSETLMSDYRELSKPGQSVLTVAGSPKRPCMRLILGGESLRSLKQYMLIHQDQFLSLIVEKKEVELRLDWHLKGSE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00927 424 Gene3D - 3 219 IPR023213 -
Rops7g00927 424 Gene3D - 220 411 IPR023213 -
Rops7g00927 424 SUPERFAMILY CoA-dependent acyltransferases 36 196 - -
Rops7g00927 424 Pfam Transferase family 6 350 - -
Rops7g00927 424 PANTHER - 4 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00927 Rops-Chr7 12404597 12405955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00927 7 325 Monolignol Biosynthesis Gene Families AT5G48930 23.276 5.60e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00927 - - gmx:100797294 525.783