Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00926 ATGACTCGTGAGGCAATAATGGTCATAGAGCAGTGTGAAGTTGCACCACCACCAGGTTCAGTTCCCTCAACCACACTTCCCCTCACTTTCTTTGACCTTCCATGGTTTTACTGCCACCCCGTCCAACGCATCTTCTTTTACCAGTTTCCCCATCCAACCCAGCACTTCCTTGAAGAAGCACTTCCCACTCTGAAGCACTCTCTTTCCCTCACCCTCCAACACTTCTTCCCTTTCGCCGCCAATCTCATCGTCCCTCCACACTTTCACCACCATGTCCCTTACATCCGCTACCTTGATGGCGACTCTCTCTCCTTCACTGTTGCAGAGTCCACTGCAAACTTCGACCTCCTCGTATCTGATTCCCCACAAGACGTTCGAAATTGGCACCCTTTTGTTCCTATGTTGCCTCCACCTCGTACAGAGGATGATGGGACACGTGTCATCCCTCTCATGGCAATTCAGGCCACGGTTCTACCAAACTCTGGATTCAGCATCTGCCTTACGTTCAACCACCTTGCCGCGGATGGGAAATCGCTTCACCATTTCATGAAGTATTGGGCCTCTGTTTGCAAGGCAAAAACAAGGGATTTGGCTTCCCTTGAAGGTTCTTTGTCTCTTCCTTTCCATGGTAGGGACAGAGTTAAAGACCCAAAAGGGCTTAAGCTTATCTACTTGCGAGAACTACAAGATTCGGCGTCGAAAAGCATGGAGTTTGTGGGGCTCGTGCGAGAGGTTTACACCAATAAGGTACGCGCCACTGTTGTATTGAGTCGTGAAAAAATTGAGAAACTAAAGAAATGGATCTCTCTTAAACGTGCCAGCTATGCCTCGGGGACACAGCACGTGTCAACCTTTGTGGTAACATGCTCCTTGATTTGGGTTTGTCTGATAAAATCAGAGCAAAACAAAGGACATTGTGTTGATGAACTCTGCCACGTGGCCATTCTAGCAGATTGTCGTGATCGTCCTGAATTTTCATTGCCTTTAAGTTACTTTGGGAATTGTCTAGCCACTGGATTAGTGGCGATTAGGAGGGGTGAGGTCGTGGGAGAAAATGGGATCGCTGTGGCAGCAAATGCTATTGAGAGGAAAGTTAGAGATTTGAAGAGTGATGCATTAAGAAATGCTGAAACATTAATGTCGGATTATAGAGAATTATCGAAACCAGGCCAATCTTTGCTAATAGTTGCAGGGTCACCAAAACTGGCCGTGTATGAGACTGATTTTGGGTGGGGAAAGCCTAAGAAGTCTGAAGCAGTACATATTGATTCATCAGGATCAATTTCTCTGTCTGATAGTAGAGATCAAGAAGGTGGAATTGAGGTTGGATTCGCACTTGAAAGGATTCGAATGAATACTTTCTCCAACATCTTAGAAGAACAACTTCATAATATTATAGCATGTGAATGA 1410 0.4589 MTREAIMVIEQCEVAPPPGSVPSTTLPLTFFDLPWFYCHPVQRIFFYQFPHPTQHFLEEALPTLKHSLSLTLQHFFPFAANLIVPPHFHHHVPYIRYLDGDSLSFTVAESTANFDLLVSDSPQDVRNWHPFVPMLPPPRTEDDGTRVIPLMAIQATVLPNSGFSICLTFNHLAADGKSLHHFMKYWASVCKAKTRDLASLEGSLSLPFHGRDRVKDPKGLKLIYLRELQDSASKSMEFVGLVREVYTNKVRATVVLSREKIEKLKKWISLKRASYASGTQHVSTFVVTCSLIWVCLIKSEQNKGHCVDELCHVAILADCRDRPEFSLPLSYFGNCLATGLVAIRRGEVVGENGIAVAANAIERKVRDLKSDALRNAETLMSDYRELSKPGQSLLIVAGSPKLAVYETDFGWGKPKKSEAVHIDSSGSISLSDSRDQEGGIEVGFALERIRMNTFSNILEEQLHNIIACE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00926 469 Pfam Transferase family 17 458 - -
Rops7g00926 469 Gene3D - 246 465 IPR023213 -
Rops7g00926 469 PANTHER - 7 464 - -
Rops7g00926 469 Gene3D - 6 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00926 Rops-Chr7 12390169 12391896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00926 44 460 Monolignol Biosynthesis Gene Families AT5G48930 23.799 1.05e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00926 - - gmx:100797294 685.256