Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00924 ATGAAGGAGGTGATGGTCATAGAGCAGTGTAAAGTAGCACCACCGCCTGGTTCACTTCCTTCAACGACTCTTCCCCTCACTTTCTTTGACCTTCCATGGTTTTCCTGCTGCCACCACCCCGTCCAACGCATCTTCTTCTACCAGTTTCCCCATCCAACCCAACACTTCCTTCAAGCAGCACTTCCCACTCTGAAGCACTCTCTTTCCCTCACCCTCCAACACTTCTTCCCCTTCGCCTCCAACCTCATCGTCCCTCCTCCACATCTTCACCACCACCACGTCCCTTATTTCCGCTACCTTAATGGTGACTCTCTCTCCTTCACCGTCGCCGAGTCAACTGCAGAAGACTTCGACCTCCTCGTCACTGTTCTACCAAACTCTGGATTCAGCATCTGCCTTACATTAAACCACCTTGCTGCAGATGGCAAATCACTTCACCATTTCATGAAGTATTGGGCCTCTGTTTGCAAGGCAAAAACAGTGAATTTGGCTTCTCTTGAAGGCTCTCTGTCTCTTTTTCCTTTCCATGACAGGGACAGAGTTAAAGACCCAAAAGGACTTACGCTTATCTACTTACAAGAACTACAAGACTCGGCGTCGGAAAGCATGGAGTATGCAGGGCTCGTGCGAGATGTTTACATTAACAAGGTACGCACCACTCTTGTATTGAGTCATGAACAAGTTGAGAAACTTAAGAAATGGATCTCTCTTAAATGTGCCAGCTACGCTTCAGGGACACTACGCTTGTCAACCTTTGTGGTAACTTGTTCCTTGATTTGGGTTTGTATGATAAAATCAGCACAAAGCAAAGGTAATTGTGTTGATGAACTCTACCACTTGGTCTTTCTAGCAGATTGTCGTGATCATCCTGATTTTTCATTACCTTCAACGTACTTCGGGAATTGTCTAGCCACTTGTATTGTAACAATCAAGAGGTATGAGATGGTGGGAGAAAATGGGATAGTTGAGGTAGCAAATGCTATTGAAAAGAAAGTTAGAGATTTTAAAAGTGATGCTCTGAGAAATGCTAAAACATTGATGTCAGATTATAGAGAATTAGGGAAACCAGGTCACTCTGTGGTAATAGTTGCAGGGTCACCAAAACTGGCCGTGTATGAGACTGATTTTGGGTGGGGCAAACCTAAGAAGTCTGAGGCAGTACATATTGATTCATTTGAATCAATTTCTCTTTCTGATTGTAGAGACGAAGAAGGAGGAATTGAGGTCGGATTCGCACTTGAAAGGAATAGAATGGATACTTTCTCCAACATCTTAGAAGAACAACTCAAAAATATTATAGCATGTAAATGA 1311 0.4378 MKEVMVIEQCKVAPPPGSLPSTTLPLTFFDLPWFSCCHHPVQRIFFYQFPHPTQHFLQAALPTLKHSLSLTLQHFFPFASNLIVPPPHLHHHHVPYFRYLNGDSLSFTVAESTAEDFDLLVTVLPNSGFSICLTLNHLAADGKSLHHFMKYWASVCKAKTVNLASLEGSLSLFPFHDRDRVKDPKGLTLIYLQELQDSASESMEYAGLVRDVYINKVRTTLVLSHEQVEKLKKWISLKCASYASGTLRLSTFVVTCSLIWVCMIKSAQSKGNCVDELYHLVFLADCRDHPDFSLPSTYFGNCLATCIVTIKRYEMVGENGIVEVANAIEKKVRDFKSDALRNAKTLMSDYRELGKPGHSVVIVAGSPKLAVYETDFGWGKPKKSEAVHIDSFESISLSDCRDEEGGIEVGFALERNRMDTFSNILEEQLKNIIACK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00924 436 Pfam Transferase family 119 425 - -
Rops7g00924 436 Pfam Transferase family 15 82 - -
Rops7g00924 436 Gene3D - 214 432 IPR023213 -
Rops7g00924 436 Gene3D - 121 207 IPR023213 -
Rops7g00924 436 Gene3D - 1 120 IPR023213 -
Rops7g00924 436 PANTHER - 4 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00924 Rops-Chr7 12356656 12358180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00924 119 427 Monolignol Biosynthesis Gene Families AT5G48930 23.125 4.27e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00924 - - gmx:100797294 574.318