Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00923 ATGGCAGAGCCTAGAGTTCATAAGGTTATTGAGAAATGTCAGGTTGGTCCTGCAGCACCTCCCGATCCCAGAACAAATAGAACCAAGTCTCTTCCCCTCTCATTCCTTGACTTCTCTTGGGCAGGTCCTATTTACGTGAGACGCCTGTTCTTCTATAAGTTTCCCTATTCCACCCACCATTTCTATGAAACCACACTCCCCACTCTCAAACGCTCTCTCTCTCTCACCCTTCAACATTTCTTCCCCCTCGCTGGAAATCTCCTCTGTCCACCACCACCCCACAAGCCCTTCATTCGATGCACTGATGATGACTCTGTCACCTTAACCATCATGGAATCCACAGCTGATTTCGAGCATCTCTCAGCCAACCACCCCAAAAGTCTTAAAGACTTGAATCACTTGGTTCCCAAGTTGACATTCACAACTGGAGATGATGATGACACTTTCATCTTCCCTCTGTTGACATTTCAAGTCACGGTTTTCCCTAACCATGGCCTTTGCATAGCTATCACGTATTGCCACGTGATGGATGACAGGTGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAACGGTGGAGTTGACCTGACACTACCTTGCTTTGATAGGCAAGTGTTGAAGGACCCCAAGGGGCTCGAGGCTATTTTCTTAAGGGAATACCTTGAAGAGAGGACAAGCTGGAAGGACAAACTCATCACTCAAACGACTGGGCATTTTGGTGGTGATGAGGACCATGTTAAGGCGACGATTGTGTTTGGTAGAGAAGACATTGATGGACTGAAAAGATGGGCGTTGAATCAATGGAAGAAAAATGATGAATTCAATGCGCTGCAATATCTATCAAAATTTGTGGTGATGTGTGCTTTCGTGTGGGCTAGCTTGATTAAAACAAGATATAGAAATGATGACGAAGAAGAAGAGATGAAAGAGGAGTATTTTGGTTTTGCTGCAGATTGTAGAGATCGCCTTGAGTACCCGATACCAGCGACATACTTTGGAAACTGCTTAACGCGATGTCATGCAACGCTTAAGAGAAAGGACCTCAAGGGAGAAGGTGGTTTTGTAAGAGCAGTCAAGGTCATTGAAAGGGCAGTAGCTGATATGAAAATTGAACCATTTGAAGGCGCAGAAAATTGGAAGGCATTGTTTTTGAAGATGTTTGGATTGGGAAGTACGTTGCTGGTTACAGGGTCGCCCAAGTTCGCTGTTTATGAGACTGACTTTGGATTTGGAAGACCTACCAAAGTTGAGATGCTACATTCCTTCAAGTGTATGTCTCTTGCTGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGCTTGGTACTTGGGAGCAGCGAATTTGAATATTTCATCTCTATCGTTAAGCAAGAATTCGAAGCTTTAAAATCCTAG 1404 0.4452 MAEPRVHKVIEKCQVGPAAPPDPRTNRTKSLPLSFLDFSWAGPIYVRRLFFYKFPYSTHHFYETTLPTLKRSLSLTLQHFFPLAGNLLCPPPPHKPFIRCTDDDSVTLTIMESTADFEHLSANHPKSLKDLNHLVPKLTFTTGDDDDTFIFPLLTFQVTVFPNHGLCIAITYCHVMDDRCCSHFMKSWSSICRNGGVDLTLPCFDRQVLKDPKGLEAIFLREYLEERTSWKDKLITQTTGHFGGDEDHVKATIVFGREDIDGLKRWALNQWKKNDEFNALQYLSKFVVMCAFVWASLIKTRYRNDDEEEEMKEEYFGFAADCRDRLEYPIPATYFGNCLTRCHATLKRKDLKGEGGFVRAVKVIERAVADMKIEPFEGAENWKALFLKMFGLGSTLLVTGSPKFAVYETDFGFGRPTKVEMLHSFKCMSLAESGDEEGGLEVGLVLGSSEFEYFISIVKQEFEALKS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00923 467 Gene3D - 245 465 IPR023213 -
Rops7g00923 467 PANTHER - 8 462 - -
Rops7g00923 467 Gene3D - 6 235 IPR023213 -
Rops7g00923 467 Pfam Transferase family 22 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00923 Rops-Chr7 12351394 12352797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00923 49 454 Monolignol Biosynthesis Gene Families AT5G48930 24.651 1.78e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00923 - - gmx:100813271 701.049