Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00921 ATGGCAGAGCCTAGAGTTCATAAGGTTATTGAGAAATGTCAGGTTGGTCCTGCAGCACCTCCCGATCCCAGAACAAATAGAACCAAGTCTCTTCCTCTCTCATTCCTTGACTTCTCTTGGGCAGGTCCTATTTACGTGAGACGCCTGTTCTTCTATAAGTTTCCTTATTCCACCCACCATTTCTATGAAACCACACTCCCCACTCTCAAACGCTCTCTCTCTCTCACCCTTCAACATTTCTTCCCCCTCGCTGGAAATCTCCTCTGTCCACCACCACCCCACAAGCCCTTCATTCGATGCACTGATGATGACTCTGTCACCTTAACCATCATGGAATCCACAGCTGATTTCAAGCATCTCTCAGCCAACCACCCAAAAAGTCTTAAAGACTTGAATCACTTGGTTCCCAAGTTGACATTCACAACTGGAGATGATGATGACACTTTCATCTTCCCTCTGTTGACATTGCAAGTCACAGTTTTCCCTAACCATGGCCTTTGCATAGCTATCACGTATTGCCACGTGATGGATGGCAGGTGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAAACGGTGGAGTTGACCTGACACTACCTTGCTTTGATAGGCAAGTGTTGAAGGACCCCAAGGGACTCGAGGCTATTTTCTTAAGGGAATACCTTGAAGAGAGGACAAGCTGGAAGGACAAGCTCATCACTCAAACGACTGGGCATGTTGGTGGTGATGAGGACCATGTTAAGGCGACGATTGTGTTTGGTAGAGAAGACATTGATGGACTGAAAAGATGGGCGTTGAATCAATGGAAGAAAAATGATGAATTCAATGCGCCGCAATATCTATCAAAATTTGTGGTGATGTGTGCTTTCGTGTGGGCTAGCTTGATTAAAACAAGATATAGAAATGATGACGAAGAAGAAGAGATGAAAGAGGAGTATTTTGGTTTTGCTGCAGATTGTAGAGATCGCCTTGAGTACCCGATACCAGCGACATACTTTGGAAACTGCTTAACGCGATGTCATGCAACGCTTAAGAGAAAGGACCTCAAGGGAGAAGGTGGTTTTGTGAGAGCAGTCAAGGTCATTGAAAGGGCAGTAGCTGATATGAAAATTGAACCATTTGAAGGCGTAGAAAATTGGAAGGCATTGTTTTTGAAGATGTTTGGATTGGGACGTACGTTGCTGGTTACAGGGTCGCCCAAGTTCGCTGTTTATGAGACTGACTTTGGATTTGGAAGACCTACCAAAGTTGAGATGCTACATTCCTTCAAGTGTATGTCTCTTGCTGAAAGTGGAGATGAGGAAGGAGGACTTGAGGTTGGCTTGGTACTTGGGAGCAGCGAATTTGAATATTTCATCTCTATCATTAAGCAAGAATTCGAAGCTTTAAAATCCTAG 1404 0.4444 MAEPRVHKVIEKCQVGPAAPPDPRTNRTKSLPLSFLDFSWAGPIYVRRLFFYKFPYSTHHFYETTLPTLKRSLSLTLQHFFPLAGNLLCPPPPHKPFIRCTDDDSVTLTIMESTADFKHLSANHPKSLKDLNHLVPKLTFTTGDDDDTFIFPLLTLQVTVFPNHGLCIAITYCHVMDGRCCSHFMKSWSSICRNGGVDLTLPCFDRQVLKDPKGLEAIFLREYLEERTSWKDKLITQTTGHVGGDEDHVKATIVFGREDIDGLKRWALNQWKKNDEFNAPQYLSKFVVMCAFVWASLIKTRYRNDDEEEEMKEEYFGFAADCRDRLEYPIPATYFGNCLTRCHATLKRKDLKGEGGFVRAVKVIERAVADMKIEPFEGVENWKALFLKMFGLGRTLLVTGSPKFAVYETDFGFGRPTKVEMLHSFKCMSLAESGDEEGGLEVGLVLGSSEFEYFISIIKQEFEALKS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00921 467 Gene3D - 245 465 IPR023213 -
Rops7g00921 467 Gene3D - 6 235 IPR023213 -
Rops7g00921 467 PANTHER - 8 462 - -
Rops7g00921 467 Pfam Transferase family 22 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00921 Rops-Chr7 12305438 12306841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00921 49 454 Monolignol Biosynthesis Gene Families AT5G48930 24.884 1.35e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00921 - - gmx:100813271 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00921 7 12305438 12306841 Rops7g00921 7 12305438 12306841 ECH