Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00919 ATGGCAGAGCCTAAGCTTATTGAGCAATGCCAGATTGGTCCTTCAGCAACCTCTGATCCAAGAACAAACAGAACCACGTCTCTTCCTCTCTCATTCATTGACTTGCATCTGGTAGGTCCTATTTATGTTAGACGCCAATTCTTCTATGAGTTTCCCTACTCCACCAACCATTTCTATGAAACTACACTCCCCACTCTTAAAAGCTCTCTATCACTCACCCTTCAGCATTTCTTCCCTCTCGCTGGAAATCTCCTCTGTCCACCACCACCCCACAAGCCCTTCATTCGATCCACTGATGATGACTCTGTCACCTTCACCATCATGGAATCCGCAGTGGATTTCAAGTATCTCTCAGCCAACCACCCCAAAAGTCTCAAAGACTTGAATCACTTGGTTCCCAAGTTGACATTCACAACCATGGATGATGATGACACCTTCATCTTCCCTTTGTTGGCATTGCAAGCCACGGTTTTCCCAAACCATGGCCTTTGCATCGCAATTACTTATTGCCACGTGATGGATGATAGGTGTTGCAGTAATTTCATGAAGTCTTGGTCTTCCATTAGCCGAAACGGTGGAGTTGACTTGACATCTGTAGAGAAGTCAACACCCTGCTTTGATAGAAAAGTGTTGAAGGACCCGAAGGGACTTGAGGCTACTTTCTTAAGAGAATATGTTGAAGAGAGGACAACTTGGAAGGAAAACCTTATGGGTCAGAGTGCCGGGCATGTTGGTGGTGATGAGGACTATGTTAAAGCAACTATTGTTTTTGATAGAGATGATATTGAGGAGCTGAAAAAATGGGTGCTGAATCAATGGAAGAAACATGATGAAATCAACTCACCGCAATATCTATCGAAATTTATGGTGACGTGTGCTTTCGTGTGGACTAGCTTGGTTAAAACAAGATATGAAAATGATGATGAAGAAGAAGAAGTGATGAAAGAGGAGTACTTTCGTTTCGCTGCAGATTGCAGTGATCGCCTTGAATACCCGATACCAGCAGCGTACTTTGGAAACTGCTTAACCCTATGTTATGCAACGCTCAAGAGAAAGGACCTCAAGGGAGAAGATGGTTTTGTGAACGCAGTCAAGGTCATTGAAAGGGCAGTAACTGATATGAAAAATGAACCCTTTAAAGATGCAGAAAATTGGAAGGCTACGTTTACAAAGATGTATGTGTTGGGAAGTACTTTGCTGGTTACAGGGTCGCCCAAGTTCACAGTTTATGAGACTGACTTTGGATTTGGAAGACCTACCAAGGTTGAGATGGTACATTCCTTCAAGGGTATGTCTCTTGCTGAAAGTGGGGACAAGGAAGGAGGACTTGAGTTTGGCTTGGTACTTAGAAGCAGGGAATTTAAATATTTCATCTCTGTCATTAAACAACAACTTGAAGAATTGAAAAATCCTAAATGTATGTGA 1425 0.4281 MAEPKLIEQCQIGPSATSDPRTNRTTSLPLSFIDLHLVGPIYVRRQFFYEFPYSTNHFYETTLPTLKSSLSLTLQHFFPLAGNLLCPPPPHKPFIRSTDDDSVTFTIMESAVDFKYLSANHPKSLKDLNHLVPKLTFTTMDDDDTFIFPLLALQATVFPNHGLCIAITYCHVMDDRCCSNFMKSWSSISRNGGVDLTSVEKSTPCFDRKVLKDPKGLEATFLREYVEERTTWKENLMGQSAGHVGGDEDYVKATIVFDRDDIEELKKWVLNQWKKHDEINSPQYLSKFMVTCAFVWTSLVKTRYENDDEEEEVMKEEYFRFAADCSDRLEYPIPAAYFGNCLTLCYATLKRKDLKGEDGFVNAVKVIERAVTDMKNEPFKDAENWKATFTKMYVLGSTLLVTGSPKFTVYETDFGFGRPTKVEMVHSFKGMSLAESGDKEGGLEFGLVLRSREFKYFISVIKQQLEELKNPKCM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00919 474 Gene3D - 247 468 IPR023213 -
Rops7g00919 474 Gene3D - 4 237 IPR023213 -
Rops7g00919 474 PANTHER - 5 466 - -
Rops7g00919 474 Pfam Transferase family 22 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00919 Rops-Chr7 12282746 12284170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00919 16 457 Monolignol Biosynthesis Gene Families AT5G48930 24.078 5.46e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00919 - - aprc:113855905 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00919 7 12282746 12284170 Rops7g00919 7 12282746 12284170 ECH