Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00911 ATGGAGTTTGACCTTGAAAACCCTCTAGAAAACTTCCATGACCTTCCTTGTGATGCTGTCTCCTCCCTCTTCCTCATTGAATCTGACCATATTCCACCTTCAAATTACTTTCAGAGTCTCAAAACCAGCGACTTTGACATCTCAATTAGAAGAGATATCATCTCTTTGATCTCACAGTTGTCCTGCACCTTCGATCCATTTCTTCCTTACCTAGCTATCAACTATCTAGATCGCTTCCTCGCTAATCAAGGGATATCACAACCAAAGCCATGGGCCAATAAGCTTCTTGCAATCTCTTGTTTCTCTCTAGCAGCTAAGATGTTGAAGACAGAGTACTCTGCAACTGATGTTCAGGCTCTTATGAATCATGGTGATGGTGGTGTCATTTTTGAGACACAAACAATACAAAGAATGGAAACGCTTATCTTGGGGGCTTTACACTGGCGAATGCGTTCAATCACTCCCTTCTCTTTCATTCCTTTCTTCACCAATTTGTTCAGGCTCAATGACCCAGCATTGAGACAGGTTCTGAAAAATCGAGCATCTGAAATTATATTGAAGTCACAAAGAGAGATTAAGGTTTTGGAATTCAAGCCATCTACAGTTGCTGCATCAGCACTTCTGTATGCTTCACATGAGTTGTTTCCCTTCCAATATCCGTGCTTCTTAACAGCAATATCCGATTGTTCATATGTAAATAAAGAAAGTGTGCTGCAATGCTATAATGTCATACAAGAAATAGCAAGGGAAGAGTACGAATCTGCATTCAATGTAAATTCAAGTTCAGACACACCGGTTAATGTGTTAGACGAACATTTTCTGAGCTTGGAAAGTGAAAAAACCAACGGAACCAACGTTGCTCCCACTACTCTGATGATACAAAAGAAGGACTTCAAAAGAAGGAAAATAACCGATTATGGTAGCACGGTCCAGTTTTCTAATTTTCACCAATGCTGA 957 0.4023 MEFDLENPLENFHDLPCDAVSSLFLIESDHIPPSNYFQSLKTSDFDISIRRDIISLISQLSCTFDPFLPYLAINYLDRFLANQGISQPKPWANKLLAISCFSLAAKMLKTEYSATDVQALMNHGDGGVIFETQTIQRMETLILGALHWRMRSITPFSFIPFFTNLFRLNDPALRQVLKNRASEIILKSQREIKVLEFKPSTVAASALLYASHELFPFQYPCFLTAISDCSYVNKESVLQCYNVIQEIAREEYESAFNVNSSSDTPVNVLDEHFLSLESEKTNGTNVAPTTLMIQKKDFKRRKITDYGSTVQFSNFHQC* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00911 318 CDD CYCLIN_AtCycD-like_rpt2 153 244 - -
Rops7g00911 318 Pfam Cyclin, C-terminal domain 153 251 IPR004367 -
Rops7g00911 318 Gene3D - 22 242 - -
Rops7g00911 318 SMART cyclin_7 51 144 IPR013763 -
Rops7g00911 318 SMART cyclin_7 157 246 IPR013763 -
Rops7g00911 318 FunFam D6-type cyclin 149 242 - -
Rops7g00911 318 Pfam Cyclin, N-terminal domain 26 150 IPR006671 -
Rops7g00911 318 PANTHER CYCLINS 30 254 IPR039361 -
Rops7g00911 318 FunFam D6-type cyclin 33 148 - -
Rops7g00911 318 Gene3D - 33 151 - -
Rops7g00911 318 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Rops7g00911 318 SUPERFAMILY Cyclin-like 12 150 IPR036915 -
Rops7g00911 318 SMART Cyclin_C_2 153 268 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00911 Rops-Chr7 12180961 12183201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00911 1 281 Core Cell Cycle Gene Families AT4G03270 47.826 3.38e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00911 K18812 - gmx:100799951 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00911 7 12180961 12183201 Rops7g00911 7 12180961 12183201 ECH
Rops7g00911 7 12180961 12183201 Rops3g01348 3 19859378 19861504 PCT