Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00905 ATGAAACTCGTACTAAATATGAGAACCAATGTTCTGTTCTCCCTTCTTTTTTGGCTACTATTCTCCCAACTATGTTCAGCCAGAGATACATTGAACTTTGGCGAGAAGATAACTCAGCATTCAGGGAACCTTGTTTCTGCTGGAAATGAATTTGAACTGGGCTTCTTTTCTTTACCTATTGGAAGTGATAGCAAAAAATACTTGGGGATATGGTATCACAGTTTGAAACCACAAACAGTGGTATGGGTTGCTAATAGAGACATGCCTGTTGTTGAAGGTTCTAACATTGTTTTTCAAATTGCTGCTGCTGATGGAAATATTGTAGTAGCAGATGAATCAGAAAGGTATTGGTTCTCTGGACTTGAAGGGTCATGGTCCAAAAACAGGACAGTGAAGCTCCTTGATTCTGGGAACCTAGTACTAATGGATGGTAACTCAGGAATGAGTAGTTACCTTTGGCAGAGTTTCCATAACCCAACAGACACGTTTCTTCCTGGCATGAAAATGGATGAGAATTTAATGTTGACTTCATGGAGAAACGACAATGACCCTGGAAGTGGGAGCTTCACCTTTAAGAAGGCTCAAAGTGGGAACAATCGAAGCTACCTAGTGAAAAACCAGTCACAACTTTATTGGGCATTTGATGGAGTCAATTCAGAAGGGATATCCTCAGTCATACTTCAGTTGTTGGCCAACACAACCTCGAATGCTTCATCGTACATGTTTTTAAACAGAACGATCAACTCAAAATCGAGACCATATGATTATGAGAAATCAAGGTTGTTAATGAATTCTAACGGGGAGATCCAGTTTCTGAAGTGCTGGAACGACACACAATGGATTAAGCAATGGTCTGGGCCAGCTGATAAGTGTGACATACACAACTACTGCGGGTACTTTAGCAGCTGCAACATAAATTATCGGCAACCCTGCAAATGTTTGCCAGGATTCAGTCCCAGGTTGCCTGATAATCAGTACCTAGGAGGGAGATTCCTAGGTTGTGTCAGAAAATCAAAGCCGTGTTCCAGCAATGACATGATGTTCCTCAACTTAACAAAGATAAAAGTGAGAAACCCAGACAAGGTATTTCAAACAGAAACAGAAGCAGATTGCCGATCTTTGTGCCTTAACATGTGTCCTGCCATCCAGTGCCAGGCCTATTCATATAATACTACATATAGCCATCGTAGTTCCTTAGCATGTGAGATCTGGATACGGGGTTTACCTACACTTCAAGAGGAGCAAGATGGTGGTAGTGATCTTTCTATCTTGGTCGAGAGATCAGATATAGCATCAACTGAAAATTCGTGTGAACCTTGCGGCACATATATAATTCCTTATCCTCTAAGCACTGGGCCAAACTGTGGAGACCCCATGTACAACAAATTCAATTGCAGCTCCACGACAGGCCAGGTTAGCTTCATGATGCATGGAGGAAAACAATACCGAGTTACCTTGATCGATGAAGTTGCCAGAAAGTTTTACATCCAAACGAGTGATTCAGAGCACTGTGGCTCCAGTTTCAGCCATCAAAATTACAAGCCTGATTATCCATTTAATGTGACTAATTGGTGCTTTAAAGATGATGAAATAGAGTTCAGTTGGCAACCAGCACGAGAACCGCTCTGTACTGAGAAAATAGACTGCAAGAATTGGCCTCATTCAACATGCAATGCAACAATTGAAGGGGAAAGTAGGTGCCTTTGCAACCCAAACTATCAGTGGAATGGCACAAGTTTAAGTTGTGCCCAAGAACCAACAAGAAATCATTCAACCCACAAACTGGCATTGATTCTTATAGCAATTCTTACGGGAACCACAATCCTGGCATGCACAATAATAGTATTTGCTTATGTGCGGAGAAGGAAAGCAGCCCATAAGATTGATAGGGTAAACATTCAAATTCAGGAGAGCTTGAATGATAGTGAAAGACAAGTGAGAGGTTTGATTGGTTTAGGAAGTTTAGAAGACAAAGACAGTGAAGGCATTGAAGTACCTTATTATCATTTGGGAAGCATTCTAGCAGCTACAGATAATTTCTCAGATTCAAACAAGCTTGGAAGAGGAGGTTACGGGCCGGTCTATAAGGGAAGGTTTCCTGGAGGTCAAGAGATCGCTGTAAAGAGGCTTTCAAGTGTTTCCACTCAAGGCTTACAAGAATTCAAAAATGAGGTTGTTTTGATTGCCAAACTTCAACATCGGAACCTTGTTAGACTTAGGGGCTATTGCATACATGGAGATGAAAATATCTTACTTTATGAGTACATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGGACACGAACTTTGCTCCTGGATTGGCAAATGCGGTTTGACATAATTCTAGGCATTGCACGAGGGCTGCTCTATCTCCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTAAAAACCAGCAACATTCTTTTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGGGGTAAAGAGACTGAAGCAAGCACAGAGAGGGTAGTGGGAACCTATGGATATATGGCTCCAGAGTACGCCTTGGATGGATATTTTTCAATCAAATCAGATGTTTTCAGCTTTGGTGTAGTCCTACTAGAGATTCTCAGTGGTAAAAGGAACACGGGTTTCTATCAGTCCAAACATATTTCTAGCCTTTTGGGATATGCATGGAGATTATTTACAGAGAATAAGCTGCTGGATTTAATTGACCCTTCTTTGCACGAAACTTGCAATGAAAATCAATTCATTAAGTGTGCGACTATTGGGCTCTTATGTGTACAAGATGAACCAGGTGATCGACCTTCTATGTCAAATGTTGTGACAATGCTTGACAGTGAGATTGCAACCATTCCAATTCCAACGCAGCCAACTTTTTTTGCGGTCAAGCGTCAATGTAGCACAACTTCTTCTTCTAGCAAACCAGAAATAAGTACGCAATTTGATACCAGTTATCAAGAAGGTCGATAG 2991 0.4122 MKLVLNMRTNVLFSLLFWLLFSQLCSARDTLNFGEKITQHSGNLVSAGNEFELGFFSLPIGSDSKKYLGIWYHSLKPQTVVWVANRDMPVVEGSNIVFQIAAADGNIVVADESERYWFSGLEGSWSKNRTVKLLDSGNLVLMDGNSGMSSYLWQSFHNPTDTFLPGMKMDENLMLTSWRNDNDPGSGSFTFKKAQSGNNRSYLVKNQSQLYWAFDGVNSEGISSVILQLLANTTSNASSYMFLNRTINSKSRPYDYEKSRLLMNSNGEIQFLKCWNDTQWIKQWSGPADKCDIHNYCGYFSSCNINYRQPCKCLPGFSPRLPDNQYLGGRFLGCVRKSKPCSSNDMMFLNLTKIKVRNPDKVFQTETEADCRSLCLNMCPAIQCQAYSYNTTYSHRSSLACEIWIRGLPTLQEEQDGGSDLSILVERSDIASTENSCEPCGTYIIPYPLSTGPNCGDPMYNKFNCSSTTGQVSFMMHGGKQYRVTLIDEVARKFYIQTSDSEHCGSSFSHQNYKPDYPFNVTNWCFKDDEIEFSWQPAREPLCTEKIDCKNWPHSTCNATIEGESRCLCNPNYQWNGTSLSCAQEPTRNHSTHKLALILIAILTGTTILACTIIVFAYVRRRKAAHKIDRVNIQIQESLNDSERQVRGLIGLGSLEDKDSEGIEVPYYHLGSILAATDNFSDSNKLGRGGYGPVYKGRFPGGQEIAVKRLSSVSTQGLQEFKNEVVLIAKLQHRNLVRLRGYCIHGDENILLYEYMPNKSLDSFIFDRTRTLLLDWQMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGYFSIKSDVFSFGVVLLEILSGKRNTGFYQSKHISSLLGYAWRLFTENKLLDLIDPSLHETCNENQFIKCATIGLLCVQDEPGDRPSMSNVVTMLDSEIATIPIPTQPTFFAVKRQCSTTSSSSKPEISTQFDTSYQEGR* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00905 996 ProSiteProfiles Protein kinase domain profile. 680 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00905 996 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 119 975 - -
Rops7g00905 996 Pfam PAN-like domain 341 408 IPR003609 -
Rops7g00905 996 Gene3D - 22 158 IPR036426 -
Rops7g00905 996 Gene3D Phosphorylase Kinase; domain 1 655 755 - -
Rops7g00905 996 SUPERFAMILY Protein kinase-like (PK-like) 663 988 IPR011009 -
Rops7g00905 996 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 184 IPR036426 -
Rops7g00905 996 MobiDBLite consensus disorder prediction 976 996 - -
Rops7g00905 996 Pfam Protein tyrosine and serine/threonine kinase 683 951 IPR001245 GO:0004672|GO:0006468
Rops7g00905 996 CDD B_lectin 44 159 IPR001480 -
Rops7g00905 996 CDD STKc_IRAK 686 952 - -
Rops7g00905 996 SMART serkin_6 680 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00905 996 Gene3D Transferase(Phosphotransferase) domain 1 756 958 - -
Rops7g00905 996 SMART ntp_6 343 425 IPR003609 -
Rops7g00905 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Rops7g00905 996 Pfam S-locus glycoprotein domain 252 320 IPR000858 GO:0048544
Rops7g00905 996 ProSiteProfiles Bulb-type lectin domain profile. 36 154 IPR001480 -
Rops7g00905 996 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 756 959 - -
Rops7g00905 996 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 648 755 - -
Rops7g00905 996 FunFam Receptor-like serine/threonine-protein kinase SD1-8 23 156 - -
Rops7g00905 996 SMART blect_4 30 159 IPR001480 -
Rops7g00905 996 ProSiteProfiles PAN/Apple domain profile. 341 437 IPR003609 -
Rops7g00905 996 Pfam D-mannose binding lectin 79 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00905 Rops-Chr7 12093366 12097969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00905 672 989 Receptor kinase-like Gene Family AT4G23140 55.793 5.09e-123 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g00905 PK_Tyr_Ser-Thr 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00905 - - gmx:100807185 1265.37