Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00891 ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCAGTATATTATGGATGCAGAGAAGACGCTTTGCGGAGGCAAGGGTGGGAATAATGGCTTCAATTCAAAGTTGCTTAAGTTTGCTGACAAGAAGATGAAGGCGAGGAAGAGTGAATTGGGGTTGGAAAGAGTGAGCAAGAGAAGCAGTGATGTTGACAATGGTGAAATTTGTGGGGTGCAGAAGGAGGAAGTGGAAGAGGGTGAATTGGGGACATTGAAGTGGCCAAGAACTGACCTTGAGAATGGTGAGTTCGTGCCGGAGAATGGAGAGATTGTGAGTGAGAAATGGAAAACAAGGGAGCTGGAGAAGGGAGAGATTCATTCTGGGAAATGGAGAAGAGAGGAAGTGGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGAGAAGCTGAGAAAAGTGAATATGGTTCGTGGAGAGGTATGAAGGATGACATTGAGAAAGGAGAATTCATTCCAGATAGATGGTATAAGGGAGACACGGGGAGGGAAGATTATGGCAACAGTAGAATCCACAGGTACCATTCAGGTAGGGAAAAAGGGTGGAAAATTGAATCTGAACGTACACCCCCTTCTGGGAGATATGCAGGTGATGATTTTTATAGAAAGAAAGAATTGAATAGAAGTGGGGGTCAGCATGGTAAAAGTTCTCCCAGGTGGGAGAGTGGACAACAGAGGAATATCAGGATCAGTTCGAAGATTGTAGATGATGATAAAAATGTACACAGCAATGGTAAGGACCATACACGAGGTTTCACTTCTGGTAGTCGCTTGAAGAGGCTCGGCAATGATTCTGACAGCACTGAGCGGAAGCATTCGGCGGATTTTACTGGTTCGAAAAGCAGAAGGCTTTCTGATGATAGCTATCGCCATGTTCATTCAGAGAATTATTCTCGTCACTCTGTGGAGCGGTCTTACAGAAATAATAATTCCACTAAAGTATCTGCAGAAAAGCATTCTTCTAGGAATCATGAATCTTTGTCTGCCAGACCAGCGTATGACAGACATGGACGCAGCAGCCCTGGTCATTCTGAGCGGTCCCCACGAGACCGAGGTAGGTATTATGATCATAGAGAACGCACACCGGTGCGTCGATCTCCCAGTGGTCGTGACAGATCTCCATATGGCAGGGAGAGGTCTCCATATATGAGGAACTGGGATAGAAGTCGTCAGCATGATCATAAATTGAGAAGTCCAACACGTGTTGAGCAGTCACCACAAGATCGAGGTTGGCGAAATGTTCGCAGGGACCGTACTCCAAATTCAGTAGAAGGACCCTCCCTTGATCGAACCAGGAAAGATAATCATCAAGAAACAAGTTCTAAAACCTCATCAAGTGAAAAATATAACTCCCAGAATAGTTGCAGGGATCATGAAGATAAGCACATTCAGAGGGATTCAAATTGTTCAGGTACAGAATCTCAAGGTGAAGGAATAGTGCAAACTACCAATGAGTCTATTGAGAAAGAAACCTGCAGTCAACCTGTAAAGGAACAGCAGTCCTGCAGCCCAACTGTTAGCTCCAAAGAATCTCCTCGCTTTGAGCCACCTCCTGAGGAGCCGCCTTCTATGGAAGAAGATATGGACATCTGTGATACCCCTCCTCATGTCCCTGTGGTGACAGACTTGTCATCAGGGAAATGGTTTTACCTCGATTACGGAGGTGTAGAAAATGGGCCTGCTAAATTGTGTGACATCAAGGTCCTTGTTGATGAAGGGGTACTCATGTCAGATCACTTTATCAAGCACTTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCACATCACCTTTGGCAGCCCAGAGTTTTCCATCCATTGTGTCGGATACCATAACTCAGCTGGTAAATCCTCCAGAAGCTCCTGGTAATTTTTTGGCTGATAATGCAGATATTACTCAATCTGGTCCTGAGAATTATCAGGATATGCCAGCCCCCTCGCTGCATCCCCCGGTATGCCATGATGACAGTGTGCTTCCATCTGAACATTTGGACGATCTCCACATTGATGAAAGGGTTAAAAATCTGTTAGAGGGTTATGATGTCATTCCTGGGAAGGAACTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAAGGGGAGGGATTGGGAGACCATGAAGGTTTTCCTTGGAATGTTTCCTGCCTTAGGGAAGATTGTGATTCAAGTACTGATTTAGCATCAAGGGATTCTGAATCGCAGTTTAGTATGTCCTGTGACAAAGATAATGGATTTGCCTTTGGTGTTCCTAGTGACTGGTTTTCCACCCGTTGGTCATGCAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTCTAGGAAGAAACTTGTCCTAAATAATGGTTTTCCATTATGTCAAATGCCAAAATCTGGATGTGAAGATCCTCGATGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAGGAGGCTTGATCTCCCTCTGTGGGCTTTTTGTGCTGATGAGTGGGTTGATTGCAGTGCTGCAATCAGATCAGTACTAAGTAAGCCTGCTACTGCGAGAGGAGTAAAAGGAAATGTTCTTTCGGTGGTCAGGATAAATGCATGCGTAGTCAAGGACCAGGGATCAATGGTCTCTGAGTCACGCCACAAGACTCGAGGCAAGGATAGACATCTTTCAAGGTCAGCTCGGCCTTTCTCTTCAACCAGTGATAGTAAGAGATCTTCAGCTGAAGAAGATTCTCAGTCAAAAGCTGTTAGTGGCCATGGATCTTACAAGAGCATGGAATTCATTAGCATCCCTAAAGACCATCTCTGTAATGTCCATGAATTGCAGTTACATTTGGGTGACTGGTATTATCTTGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGAGCTACAGTATTCAGTAGATCAAGGTATTATAAAAAAGCATAGCAGTGTGTTCAGGAAAAGTGATAAACTTTGGGTTCCTGTTACCTCTGCTGCTGAAACTTCTGATGTCAGTCTCACTAGCCACCGAAAAAACAGTTCAACATCTGGTGCAAGCTCTGGACTTCCATCAAAGCGAACTCAAGGTGTTTCAGATGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCATACACCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAACTGGTAATGAAATCATATAAGAGCCGGGATTTTGCTGCGGCTATAAATGAGGTTTTAGATCCCTGGATCAGTGCAAGACAACCAAAGAAAGAAATTGAGAAACAAATATATTGGAAATCAGAAGGTGATGCACGTGCTGCCAAAAGAGCCCGGATGCTGGCTGATGATAGTGAAGACAGTGATCTGGAAGATGGTGATGTTACTATTGATAAGGATGAACCCACTTTCGAGGATCTATGTGGTGATGCCATTTTCCGTGAAGAAGAAATTGATGTTACTGATGCTAATGTGGGAAGCTGGGGCTTATTGGATGGTCATATTTTGGCACGAATCTTCCATTTTTTGAAATCTGATTTGAAGTCTCTCGTCTTTGCATCAACGACTTGCAAGCATTGGAGAGCTGCTGTAAGGTTTTATAAAGAAGTTTCAATACAGGTCAATTTGTCATCCTTAGGTCATTCCTGCACTGATGACATGCTGTGGAACATTATGAATGCTTATGAGAAAGACAAGATCAATTCTATAATTCTAATGGGTTGTATCAATATCACAGCTGACATGCTTGAGAAAATCCTTCTTTCGTTTCCTGATTTATGTACCATAGACATTAGAGGATGCAGCCAGTTTGGGGAGCTAACTACTAAATTTGCCACTGTAAAATGGATCAAGAGCCGAAGTTCACGCATGACTAGAAATGCTGAGGAGCCTCATAAAATAAGAAGCCTCAAACATATTACAGAGCAAACTTCATCTGTTTCCAAATCCAGCAATTTAGGTATAGATGATTTTGGGCAATTGAAGGATTATTTCGATAGTGTGGATAAGAGAGACACAGCAAAACAATTATTCCGTCAAAACTTGTACAAGCGGTCCAAACTATATGATGCTAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGCACGAGACGTTGGGCAATAAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTAAAGGAAATTATGAAGACTAACTCCTGTGACTTTTTTGTACCCAAGGTTGCAGAAATTGAGGCTAAGATGAGAACCGGTTATTACAATAGCCGTGGGTTGAGTGCTGTCAAAGACGACATAAGTAGAATGTGCCGTGATGCAATTAAAGTGAAGAATCGTGGTGATGCTAGTGACATGAATCATATTATCACATTATTTATTCAGCTTGCAACACGGCTGGAGGAAAGTTCTAAGTCTGTGCATGACCGAGAGGCGCTACTGAAGTCAAAATATAGGAAGAATAGATTAGTGAATGAAAGGAAGTGTAGGAGCAATGGAACATATGGTGGTTTGGATTACGCAGAGTATACCTCTGATCGAGAAATCAGGAGGAGCTTATCAAAGTTGAATAATAGATCTATGGACTCAGAGAGTGAAACATCTGATGACCTTGATAGGTCTTATGAAGATGGCAAGAGTGACAGTGATACTACAACCACCAGCACTGAAAGTGATCAAGAAGTACATTCAGAAAGTCTAATTAGGGAGTCAAGAGGGGATGGATTCTTTGCACCTGAGGAAGAGTTGGATTTTATAACTGATGATCGTGAGTGGGGTGCTCGCATGACTAAAGCAAGCCTGGTTCCTCCAGTTACCAGGAAATATGAAGTTATTGATCAATATGCCATTGTAGCTGATGAGGAAGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCTGAGAAACTGAGTGCGCAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTCAAAAATTTCAAACCTAGAAAGCAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACTCATAATCTTCTGCTGGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGCAGGAGAAGCACGTCTTCATAGAAGACATACTCCTTCGAACTTTGAATAAGCAAGTTAGGAATTTCACTGGAACTGGAAGCACTCCCATGAGCTACCCTTTGCAGCCTGTTATTGAAGATATTAAAAGATGTGCCGAGGAGGACTCTGATGCAATAATCATTAGAATGTGTCAAGGAATCCTAAAGGCCATAGACAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGACTTGGTGTTGTTTGTAACAAGCAAGAAGGCTTTGCTCAAGACGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCGGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCTGAATTCTATAACATCTACCTAGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCTATGCACAAGGCTAATTATGCCAGCCGAATATGTCATTCTTGCCGACCTAACTGTGAAGCCAAAGTCACTGCTGTTGATGGTCAATATCAAATTGGTATTTATAGTGTCCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTCACAGAGAGCAAGGAGGAGTATGAAGCATCGGTCTGTTTGTGTGGAAGCCAAGTATGCCGGGGTAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGAATTGCACGGAATTCTTGATCGTCATTATTTGATGCTAGATGCTTGTGAATTAAACTTCGTGTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTCGCTTATGCTGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAAAGCATAATCTTGAAGAAAAAAGAAAATATTTTTCAGAAATATGTCTTGAAGTTGAAAGGAGTGACGCCGAAGTTCAGGCCGAGGGCGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTCGATAAGGTAAGGTATGTTATGAGATGTATTTTCGGTGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAATTGTTTCCTTCCTCTGGAAAGGGGAGAGTTCATTTGTTGAAGAGCTTCTTCAATGCATAGCTCCTCATGTTGAAGAAGACATCTTGAAGGATCTCAAATCCAAAATTCATGCTCACGATCCTTCAAGTTCTGCAGATATTCAAAAAGAGCTTCGGAAATCTCTATTATGGTTGAGGGATGAGGTTCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCACATTTATGCATATACCAAGTCCTTCTTTAGAATACGGGATTATCAAACCATTACTTCACCACCTGTCTATATTAGTCCGCTTGACTTAGGTCCCAAGTACACTAACAAGTTGGGAGCAGAATTTCAGGAATATCGAAAGATATATGGTGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCACAATCAGAGTAATGCAGATCCAGATCGTAGCCTGGCAAGAGCCGGCAGGGGTTGTTTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCAGAAGCCATCACGGCATCGGGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAACAGCCCCAGAGACCTTGGCCCAAAGACCGGATATGGTCATTTAAAAGTTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAAAAAATAAATCTCCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCGGGTGGGACCGTTAA 7005 0.4286 MGDGGVACMPLQYIMDAEKTLCGGKGGNNGFNSKLLKFADKKMKARKSELGLERVSKRSSDVDNGEICGVQKEEVEEGELGTLKWPRTDLENGEFVPENGEIVSEKWKTRELEKGEIHSGKWRREEVERGEIVPEKGGRKGEAEKSEYGSWRGMKDDIEKGEFIPDRWYKGDTGREDYGNSRIHRYHSGREKGWKIESERTPPSGRYAGDDFYRKKELNRSGGQHGKSSPRWESGQQRNIRISSKIVDDDKNVHSNGKDHTRGFTSGSRLKRLGNDSDSTERKHSADFTGSKSRRLSDDSYRHVHSENYSRHSVERSYRNNNSTKVSAEKHSSRNHESLSARPAYDRHGRSSPGHSERSPRDRGRYYDHRERTPVRRSPSGRDRSPYGRERSPYMRNWDRSRQHDHKLRSPTRVEQSPQDRGWRNVRRDRTPNSVEGPSLDRTRKDNHQETSSKTSSSEKYNSQNSCRDHEDKHIQRDSNCSGTESQGEGIVQTTNESIEKETCSQPVKEQQSCSPTVSSKESPRFEPPPEEPPSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENATSPLAAQSFPSIVSDTITQLVNPPEAPGNFLADNADITQSGPENYQDMPAPSLHPPVCHDDSVLPSEHLDDLHIDERVKNLLEGYDVIPGKELEAIKEALQMNFEYAKGEGLGDHEGFPWNVSCLREDCDSSTDLASRDSESQFSMSCDKDNGFAFGVPSDWFSTRWSCKGGDWKRNDDAQDRYSRKKLVLNNGFPLCQMPKSGCEDPRWPQKDDLYFPSQSRRLDLPLWAFCADEWVDCSAAIRSVLSKPATARGVKGNVLSVVRINACVVKDQGSMVSESRHKTRGKDRHLSRSARPFSSTSDSKRSSAEEDSQSKAVSGHGSYKSMEFISIPKDHLCNVHELQLHLGDWYYLDGSGRERGPSSFSELQYSVDQGIIKKHSSVFRKSDKLWVPVTSAAETSDVSLTSHRKNSSTSGASSGLPSKRTQGVSDGEPYTNSSLFNSIHPQFVGYTRGKLHELVMKSYKSRDFAAAINEVLDPWISARQPKKEIEKQIYWKSEGDARAAKRARMLADDSEDSDLEDGDVTIDKDEPTFEDLCGDAIFREEEIDVTDANVGSWGLLDGHILARIFHFLKSDLKSLVFASTTCKHWRAAVRFYKEVSIQVNLSSLGHSCTDDMLWNIMNAYEKDKINSIILMGCINITADMLEKILLSFPDLCTIDIRGCSQFGELTTKFATVKWIKSRSSRMTRNAEEPHKIRSLKHITEQTSSVSKSSNLGIDDFGQLKDYFDSVDKRDTAKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLKEIMKTNSCDFFVPKVAEIEAKMRTGYYNSRGLSAVKDDISRMCRDAIKVKNRGDASDMNHIITLFIQLATRLEESSKSVHDREALLKSKYRKNRLVNERKCRSNGTYGGLDYAEYTSDREIRRSLSKLNNRSMDSESETSDDLDRSYEDGKSDSDTTTTSTESDQEVHSESLIRESRGDGFFAPEEELDFITDDREWGARMTKASLVPPVTRKYEVIDQYAIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKNFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHVFIEDILLRTLNKQVRNFTGTGSTPMSYPLQPVIEDIKRCAEEDSDAIIIRMCQGILKAIDSRPDDKYVAYRKGLGVVCNKQEGFAQDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKELHGILDRHYLMLDACELNFVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSEICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEAIVSFLWKGESSFVEELLQCIAPHVEEDILKDLKSKIHAHDPSSSADIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKSFFRIRDYQTITSPPVYISPLDLGPKYTNKLGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARAGRGCLSLPDISSFYAKAQKPSRHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKSFPKFFGSPMLDAVKNKSPLDREMVHWLKHRPAIFQAGWDR* 2335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00891 2334 MobiDBLite consensus disorder prediction 885 928 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 1011 1043 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 243 258 - -
Rops7g00891 2334 CDD SET_SETD2-like 1778 1926 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 114 149 - -
Rops7g00891 2334 Gene3D SET domain 1774 1935 IPR046341 -
Rops7g00891 2334 SUPERFAMILY SET domain 1779 1927 IPR046341 -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 274 314 - -
Rops7g00891 2334 CDD F-box_SF 1173 1204 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 464 479 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 1526 1578 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 259 273 - -
Rops7g00891 2334 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1915 2334 IPR045606 -
Rops7g00891 2334 ProSiteProfiles SET domain profile. 1765 1904 IPR001214 GO:0005515
Rops7g00891 2334 MobiDBLite consensus disorder prediction 1526 1552 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 169 540 - -
Rops7g00891 2334 SUPERFAMILY F-box domain 1162 1204 IPR036047 GO:0005515
Rops7g00891 2334 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 126 2334 - -
Rops7g00891 2334 SMART set_7 1770 1910 IPR001214 GO:0005515
Rops7g00891 2334 MobiDBLite consensus disorder prediction 480 522 - -
Rops7g00891 2334 Pfam SET domain 1849 1904 IPR001214 GO:0005515
Rops7g00891 2334 MobiDBLite consensus disorder prediction 329 453 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 169 199 - -
Rops7g00891 2334 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00891 Rops-Chr7 11875733 11890195 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops7g00891 SET 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00891 K22748 - gmx:100776205 3939.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00891 7 11875733 11890195 Rops7g00891 7 11875733 11890195 ECH