Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00890 ATGGACCCAAATATCCTATCCATGTTTTCCGGCGATGCTTCCTCCTTGGACCCCATGTTTTCAGGCATCAGCCTCCAAACCCTTCTTAACCTCAACCCTTCTCTCTTAGCCGACGGGTTCCCCAACTTGGCCTTGGCCTCCCTAACCGACGACCCTCCACCAGAGAACCTTCCAGAACCCACTGAAACTCCCTCATCCAACCTCAACATCAAGAAACTCCTCGTTCCAAAAACTGAACACCCCAATCTTCATCTTCCTCCCATAGAACAACTCCTTGTTCCTCAACCCTTCAACTTCTTCCCCAAATACCAACCATCCCATGACACCTTCCACCGTCTCCCTCAACTCCATTCACCCTCAGACAGGAAACGTCTCCGCCACCATCACCCCACGACCGATACCGGAAAAGCACCGTCGGTGATTCCTCAGAGCAACCTTGCACGTCAGAGAAGGCAAAAGCTGAGTGAAAAGACACGGTGCTTGCAGAAGCTGATGCCATGGGACAAGAAAATGGACCAAGCTACCCTTCTTGAAGAGGCTTATAAGTATGTTAAGTTCTTGCAGGCACAATTCTGTGTTCTTCAGTCCATGCCCTCACAGAGTTCACCTTTTTTAGCCGCCATTCACGGCTGCTCCGGTGGAGTTGGTGGGGTTTTCGGTGAGCTGGAGAGGCTGAACCCGAGCCAGGTTTTGCAGGTGGTGGTGAACTCACCCGTTGCACAAACCAAGCTTTATTCACAAGGGTACTGTGTTTTCTCCATGGAACAGTTGACCCTTCTGAGAAAATTATCAGAGACCAGACAACAGCACCAGCAACAAATGTCTGATCATGCTTCCTCCAAAACTTTCTTCAACTAG 858 0.5012 MDPNILSMFSGDASSLDPMFSGISLQTLLNLNPSLLADGFPNLALASLTDDPPPENLPEPTETPSSNLNIKKLLVPKTEHPNLHLPPIEQLLVPQPFNFFPKYQPSHDTFHRLPQLHSPSDRKRLRHHHPTTDTGKAPSVIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFCVLQSMPSQSSPFLAAIHGCSGGVGGVFGELERLNPSQVLQVVVNSPVAQTKLYSQGYCVFSMEQLTLLRKLSETRQQHQQQMSDHASSKTFFN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00890 285 MobiDBLite consensus disorder prediction 117 139 - -
Rops7g00890 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Rops7g00890 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 200 IPR036638 GO:0046983
Rops7g00890 285 Gene3D - 143 202 IPR036638 GO:0046983
Rops7g00890 285 SMART finulus 144 193 IPR011598 GO:0046983
Rops7g00890 285 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 119 263 IPR045843 GO:0003700|GO:0006355
Rops7g00890 285 MobiDBLite consensus disorder prediction 46 67 - -
Rops7g00890 285 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00890 Rops-Chr7 11864490 11865347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00890 150 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 45.217 9.76e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Rops7g00890 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00890 - - aprc:113855910 310.842