Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00887 ATGGAATTGACAAGACCTGGTTATGCGCTTGTTTATGTCATTCTTCTCTGCGTGTTGGTCAAAAGGGACACAGAGGGAAAGAGGTGGAAACATGAGGAGTTTTATAGAGATAATGGTGCTTTGTCATCGTCCCTTCCTATAGATCGAAAAAAGGTTGTAGAGAAGAAAATCTGTTTAAACCTTGTATACGAGGTAGAACAGGTGTGGAAACATTGCAGGAAAGAAATGATACAGAGGAACAATGAAGTTCAAGATTTTGACTTGCATCTATTGGATGGAAGCAGTGACAAGAGATCTACTCTTTCAATAAAAAAGGACATTCATAAACAATACTTTTTGAATTGCTTGAGACGCAGAAATCCTCCTACTCCTATTTCAGAAGAGCAAGAACATATGCCAAAGAAGCATTATGTTTCACTCTTTGGTTTAACAGATAGTCATAGATATTTGCTAGAGTCACCACATAATCAGATACCACCAGCCCCTAATTCTGTTCCATCACCACCAGACACTTCTCCATCTTCAACTCCGAAGCTCCCATATGATGGTTCATCATTCCTTCCAGCTATTTTATTGCCACCCCCACCTCCACCTCCACCACCACCTCCTCATGTTTTTGATCCCAAACATGATGCCAAACAACGGAAAACAATTATTTATGGTGCTGCTGCATCAGGAATTATAATCTTAATAGGCTTGTTCCTATGCTGTCGTGAGATCAGGAAGAGCAAAAAAGTAGATGAAAGGCCTTTACTCATATTAAACTCAAGTAATTTATCTGGTGGTTCACAGAAGCCTGGTGGATTGGAAAATTCTGATATAAAAGAAGCTGGTATTAATAATGGAAAGAGCCCTTCTATTGTTAAGAATTTGTCTATTAAGCTTGAAGACAACAATGCCTCACTGGCTGCAACAACATCATCAGATGGCAATGGACAAGTACCACTCTCTCTATTAAAACACCCTTCAGTAAGATTAGCCTCTAAGGCTCCTCCAGCGCCACCTGCACTTGCACCTCGCCCTCCACCTCCTCCTAAACTAGCTCGGCCTCCACCACCTGCTCCTCCCAAACCAATGGCAGGTATAAATCAACCTTCACCTCTAGGACCACTTCATTCTGGTGAGGGTGCTGAATCTGATGCTCCAAAACCGAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCAAATCCTGATCATGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTTAGTGAAGAGAAGATAGAGTCTTTATTTGGCTGCACCAACCAGAACAGAAATGAAAGAAGAAAACAGTCACCATCTTTAGAACCTTCTGTCCAGTACATTCAGATTATTGACCCCAAGAAAGCACAGAATTTATCAATTCTTTTACGGGCTCTGAATGTGACCACAAAAGAAGTTATTGAAGCCCTTAATGAAGGTAACGAGATTCCTGTTGAGCTTATCCAGACATTATTGAAGATGGCGCCAACAACGGATGAGGAGCTGAAGCTAAGGTTATTCACAGGCGACATTTCTCAACTTGGCCCTGCAGAGAGGTTTCTCAAGGCCTTGGTTGATATTCCATTAGCTTTCAAACGTCTTGAGTCTCTATTGTTCATGTTTACACTTCAAGAAGAGGCCTCAAGCATTAAGGAGTGCTTTTCAACATTAGAGGTTTCTTGCTACAAACTAAGAAAAAGCAGGCTCTTCCTAAAGCTATTAGAAGCAGTTCTGAAAACTGGAAACCGCATGAATGATGGCACCTATCGTGGTGGTGCTCAAGCAATTAGGCTTGACACACTTTTGAAACTGTCAGATGTAAAAGGAACCGATGGCAAGACCACACTATTACACTTTGTGGTTCAGGAGATTATACGTTCTGAGGGCATAAGAGCTGTAAGAGCAGCAAAAGCAAGTGGAAGCCATTCTAGTATGAAAACCGAGGATTTCATTGAGGATAGCAATGGAGAATTAGAAGATCACTATCGTAGCCTTGGTCTTCAAGTGGTTTCAGGTCTAAGTATTGAACTAGAAGATGTGAAAAAGGCAGCATTAATAGATGGTGATGCACTAACAGCTGCAGTGTTGAAACTTAATCAGTCATTGGCAAAAACTGAACACTTGTTGAATAATGATTTGAAGGATATTGAAGAAGACAGTGAGTTCCAACATTCCCTGGCAAGTTTTGTGGAGAAAGCAAAAGCAGAAGTGTCATGGCTGACAGAGGAAGAGAAGGGGATAATGGCTGAGGTTAAGAGCACTGCAGATTATTTCCATGGGAAAGCAGGAAAAGATGAAGGGTTGCGTTTGTTTGTGATCGTACGTGATTTCTTGAAAATGTTGGACAAGGCTTGTAAAGAGGTGAAAGATACAACAGTGAAGACAGTGAAGGCTTCTTGCAAGAAAGAGGAGTCATCAGTGTCATCCTCTCCAGACACTAGTCATAATCAGTTACCTTCTGATATGCACAAGAGACTATTTCCAGCAATAGCAGAGAGGAGACTGCATGATTCTAGTTCTGATGATGATGATGATGATGATGAGAGCTTACCCACGTAG 2556 0.4151 MELTRPGYALVYVILLCVLVKRDTEGKRWKHEEFYRDNGALSSSLPIDRKKVVEKKICLNLVYEVEQVWKHCRKEMIQRNNEVQDFDLHLLDGSSDKRSTLSIKKDIHKQYFLNCLRRRNPPTPISEEQEHMPKKHYVSLFGLTDSHRYLLESPHNQIPPAPNSVPSPPDTSPSSTPKLPYDGSSFLPAILLPPPPPPPPPPPHVFDPKHDAKQRKTIIYGAAASGIIILIGLFLCCREIRKSKKVDERPLLILNSSNLSGGSQKPGGLENSDIKEAGINNGKSPSIVKNLSIKLEDNNASLAATTSSDGNGQVPLSLLKHPSVRLASKAPPAPPALAPRPPPPPKLARPPPPAPPKPMAGINQPSPLGPLHSGEGAESDAPKPKLKPFFWDKVAANPDHAMVWHEIRAGSFQFSEEKIESLFGCTNQNRNERRKQSPSLEPSVQYIQIIDPKKAQNLSILLRALNVTTKEVIEALNEGNEIPVELIQTLLKMAPTTDEELKLRLFTGDISQLGPAERFLKALVDIPLAFKRLESLLFMFTLQEEASSIKECFSTLEVSCYKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAIRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRAAKASGSHSSMKTEDFIEDSNGELEDHYRSLGLQVVSGLSIELEDVKKAALIDGDALTAAVLKLNQSLAKTEHLLNNDLKDIEEDSEFQHSLASFVEKAKAEVSWLTEEEKGIMAEVKSTADYFHGKAGKDEGLRLFVIVRDFLKMLDKACKEVKDTTVKTVKASCKKEESSVSSSPDTSHNQLPSDMHKRLFPAIAERRLHDSSSDDDDDDDESLPT* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00887 851 Pfam Formin Homology 2 Domain 378 780 IPR015425 -
Rops7g00887 851 ProSiteProfiles Formin homology-2 (FH2) domain profile. 376 806 IPR015425 -
Rops7g00887 851 MobiDBLite consensus disorder prediction 825 839 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 798 851 - -
Rops7g00887 851 Gene3D Formin, FH2 domain 382 813 IPR042201 -
Rops7g00887 851 SMART it6_source 376 795 IPR015425 -
Rops7g00887 851 MobiDBLite consensus disorder prediction 255 285 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 801 816 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 328 363 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 152 179 - -
Rops7g00887 851 SUPERFAMILY Formin homology 2 domain (FH2 domain) 389 791 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 326 384 - -
Rops7g00887 851 MobiDBLite consensus disorder prediction 159 175 - -
Rops7g00887 851 PANTHER FORMIN-RELATED 145 839 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00887 Rops-Chr7 11849352 11854002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00887 354 834 FH2 protein (formin) Gene Family AT5G54650 58.847 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00887 - - psat:127086789 894.419