Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00878 ATGTGCAAAGGTGCAGAACAAAAAACACATGGTGGTTTCTGCAGGAAGTTCCCACCTAAAGAGAGTGCTTCACCTGGCTCAGTTAGAGGTTCTACATGTTGTGAGCTTTGTGGGTTACAAGCTTCATTGTATTGCCAAGCTGATGATGCATACTTATGTAGAGAATGTGATAGATGGGTTCATGGAGCCAATTTTTTGGCCCTTAGGCACATTAGATGCTTTCTTTGCAAAACATGTCAGAAACTTACAAGAAGATATCTCATTGGAGCCTCACTAGAAGTGGTTCTTCCAGCCAACATAAGCTGGGCCTTAGGAAACCTCCCTAACAACAGCAACCACAGAAAGTGTTCAAGAATGCATGACACCCCTTTTATGTTTCTTTGA 384 0.4245 MCKGAEQKTHGGFCRKFPPKESASPGSVRGSTCCELCGLQASLYCQADDAYLCRECDRWVHGANFLALRHIRCFLCKTCQKLTRRYLIGASLEVVLPANISWALGNLPNNSNHRKCSRMHDTPFMFL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00878 127 CDD Bbox1_BBX-like 33 75 - -
Rops7g00878 127 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 33 83 - -
Rops7g00878 127 SMART bboxneu5 29 75 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00878 Rops-Chr7 11773291 11773974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00878 1 127 C2C2-CO-like Transcription Factor Family AT3G21890 45.455 1.86e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00878 - - gmx:100500322 189.119