Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00862 ATGGGTTCAGTAGCCCACAGTGAGCCACCGAAGAGAGACTCCTCAAAGCATGAGTCAGATGGCGAGTTGGAGAGAATACTCACCAACACGAACTTGCCTCTACTGAGTCGTGTGGGCCCCGCCACATGGATCGAGCTGAAACTGCTCTTCTTCTTGGCTGCTCCCGCGGTGGTTGTTTATCTTATCAACTATGTCATGTCCATGTCCACCCAAATCTTTTCCGGCCACCTCGGTAATCTCGAACTCGCCGCCGCTTCCCTCGGTAACACCGGCATCCAAATATTCGCTTATGGCCTCATGTTGGGAATGGGGAGTGCTGTTGAGACACTATGTGGACAAGCATTTGGTGCTCAAAAGTTTGAAATGCTAGGGATATACTTACAAAGATCAACAATCCTTCTCTCATTGGCTGGTCTTGTTTTGACTGTGATTTATGTTTTCAGCGAACCCATTTTGTTATTTCTGGGGCAATCACCAAGAATTGCATCTGCAGCTGCTCTTTTCGTCTATGGTCTTATCCCTCAAATCTTTGCCTATGCTGTGAATTTCCCTATTCAGAAGTTCCTTCAAGCTCAGAGCATAGTGGCTCCAAGCACTTATATATCCGCTGCCACGTTGGTGGTTCACCTTTTGCTGAGTTGGCTTGTTGTGTATAAGGTTGGGTTGGGTTTATTGGGTGCTTCTTTGGTGTTGAGTTTGTCGTGGTGGATCATTGTGGTTGCACAGTTTGTTTACATAGTGAAGAGTGAGAGGTGTCAGCGCACGTGGCGAGGGTTCACGTTACAAGCGTTCACCGGATTGCCCGATTTTTTCAGGTTGTCGGCGGCATCTGCGGTGATGCTGTGCTTGGAGACATGGTACTTTCAGATTCTAGTTTTGCTCGCTGGACTTCTTCCTCATCCTGAGTTGGCACTCGATTCCCTTTCTATTTGTACCACAGTTTCTGGATGGGTGTTCATGATCAGTGTTGGATTGAACGCAGCTGCAAGCGTGAGAGTGAGCAACGAATTAGGAGCTAGAAATCCAAAATCAGCTTCATTTTCTGTGGTGGTGGTGACATTGATTTCATTCATAATATCAGTTATTGCAGCACTTGCGGTGCTTGCATTACGCGATGTCATTAGTTACGCCTTCACAGAGGGTGAAGAGGTTGCTGCTGCAGTCTCAGATCTTTGTCCCTTGCTATCACTTTCTCTTCTTCTCAATGGCATTCAACCCGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAACTTTCGTTGCATATGTAAACGTGGGTTGCTATTATGGAGTTGGCATACCACTGGGGTCAGTTATGGGCTTTTATTTCAACTTGGGTGCTAAGGTTGAGGAAGCAGCCAAGAGTAGAAGGCCTACCAGTGTGAATATTGGTGCAGTTTTCACCTTCGATTCGGTCATAGGTAGAGCTGCAAAGGCAGCTATGGAAATGGCTGTTTCTGATGTCAATTCAGACCCAAGAGTCCTCAACGGAACGAAGCTCAAGTTGATAATGATTGATGGCAAGTGCAATGCCTTTCTGGGATCAGCTGGAGCTTTTCAGGTACTTGAGCAAGGGGTTGCAGCCATAATTGGTCCACAGTCATCCGCCATGGCTCATACGATTTCTCAAATTTCTGATGCTGTCCAAGTTCCTCTTATTTCATATGCTGCCACTGATCCAACCCTCTCCTCCCTTCAGTTTCCTTTCTTTATTCGTACTATACAAAGTGACTTAGAGCAAATGACTGCAATGGCTGATCTAATTGAATTTAGTGGATGGAAAGAGGTCATTGCTGTATTCTTGGATGATGATTACGGAAGAAATGGAATATCTTCCTTGAGTGATGAACTTGAAAAAAGGAGATTGAAAATTTCTCACAAACTACCTTTGAGTATCCAGTTTGATCTGGATGAAATCACTAACTTGCTCAATCAATCCAAAGAGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAATCCAGATCCAAGATTGAGAATCTTTTCCATTGCCCACAAACTTAAAATGATGGCCAGTGATTATGTCTGGCTTGTCACCGATTGGCTCTCTGCTACCCTAGATTCGTTATCCCCAGTGAATCAGACCTCACTCAGTGTTCTCCAAGGGGTTGTTGGTTTTCGTCAACACATTGCAGATTCCAGAAAAAAAAGAGCTTTTATTTCTCGATGGAAAAAAATGCAAAAAGAAGGTGCAGCAAATACTAGTTTGAACTCCTATGGATTTTATGCTTATGATACAGTTTGGGCAGTTGCACATTCAATTGATAAATTTATGGAAGAACATAACAATATTACCTTCTCGCTTCATGATAGCTATAAGCTACTTCATACAGAAGGAATTGGTATTCAGCTTGAGAAGCTAAAAGTTTTTAATGGTGGATCTGATCTGGTCAACATATTATTACAATCAAATTTTACTGGCGTGAGTGGTCGTATTCACTTTAATTCAGACAGAAATATCAAAAGTGGTGGCTATGATGTTATCAATATCAATCAGATGGCAATTAATAGGGTTGGTCATTGGTCTAATTCTTCAGGATTTTCAGTTGTACCCCCTAAAGTTCTTACAAAAAAAGAACATAGCAGGTTTTCCCTGGATCAGAAGCTTGACAATATTACTTGGCCAGGTGGGAAGACAGAAAGACCACGTGGCTGGGTGATTGCTGATAATGCAAAGCCACTGAGAATTGGAGTGCCAAAGAGAGCAAGTTTTGTTGAATTCGTAACTGAAATGCAAGATAGTCATCAAATTCAGGGGTACTGCATTGATGTCTTCAAGAAAGCCCTAGAATTTATTCCATATGAAGTTCCTTTTGTATTCAAGCCTGTTGGGAATGGTAAAGCAAATCCCAATTATGATGCACTTGTGAAAATGGTTGCTGATAATGTGTATGATGGAGTTGTTGGAGACATTGCTATTGTGACAAATCGTACAAAGATTGTGGATTTTTCTCAGCCTTATATATCATCCAGCCTTGTTATAGTGGCTCCTATCAACAATGCAAAATCAAATGCTTGGGTGTTCCTCAAACCATTCACAGCAGACTTGTGGTGTGTCATTGCTGCATCATTTTTGATGATTGGAGTGGTTATATGGATTCTTGAGCACCGAATCAATGATGACTTCCGTGGTCCTCCTAAGAGACAGCTTGTGACAATGTTTATGTTCAGCCTCTCAACACTGTTTAAGACAAATCAGGAAAAGACAGTAAGCTCACTTTCTAAAATGGTAATGATTGTCTGGCTTTTCCTATTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGAAGCTTTCATCACCCATCACAGGAATTGATAGCTTGATTGCAAGTAAATCGCCTATTGGATACCAAATAGGGTCATTTGCTTACAGCTATCTGACAGATAATCTTTATGTACCAAGATCAAGACTTGTTACCTTACACTCCCCTGAGGAATATGCTGAAGCGCTTCGGAATGGGCCATCTGGTGGAGGGGTGGCGGCTATCATTGATGAGCTTCCGTATGTGGAGTTATTTCTGTCTAAGGAAACCGAGTTTGGTATTATCGGGCAGCCATTTACCAAAAGCAGTTGGGGATTTGCTTTTCAAAGAGACACTCCTCTTGCCCTTGACATGTCTACAGCAATTTTGAAACTCTCAGAGATTGGAGAGCTTCGAAAGATACACGAGAAGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGGAAAAGTAACCCAAAACCTGACCAACTTCACTTGGTTAGCTTTTGGGGTCTATATCTCTCATGTGGTGTTGTTTCTCTTGCTGCACTTGTGCTGTATCTGCTGCGAATGATTTGCCAATATGCCCGTTTCAAACAAAAACAAAAGGATATAGCTTCTTCATCCTCAGAACAATCAAGCAGTCATTGCTCCCAAGTTTTTGTTAACTTCTTTAACTTCATTGATGAGAAGGAAGAGGCCATCAAGAAAATGTTCACTCCATGTGACAATCGACACAACCCCAACTAA 4035 0.4263 MGSVAHSEPPKRDSSKHESDGELERILTNTNLPLLSRVGPATWIELKLLFFLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAQKFEMLGIYLQRSTILLSLAGLVLTVIYVFSEPILLFLGQSPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSTYISAATLVVHLLLSWLVVYKVGLGLLGASLVLSLSWWIIVVAQFVYIVKSERCQRTWRGFTLQAFTGLPDFFRLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTVSGWVFMISVGLNAAASVRVSNELGARNPKSASFSVVVVTLISFIISVIAALAVLALRDVISYAFTEGEEVAAAVSDLCPLLSLSLLLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPLGSVMGFYFNLGAKVEEAAKSRRPTSVNIGAVFTFDSVIGRAAKAAMEMAVSDVNSDPRVLNGTKLKLIMIDGKCNAFLGSAGAFQVLEQGVAAIIGPQSSAMAHTISQISDAVQVPLISYAATDPTLSSLQFPFFIRTIQSDLEQMTAMADLIEFSGWKEVIAVFLDDDYGRNGISSLSDELEKRRLKISHKLPLSIQFDLDEITNLLNQSKEFGPRVYVVHVNPDPRLRIFSIAHKLKMMASDYVWLVTDWLSATLDSLSPVNQTSLSVLQGVVGFRQHIADSRKKRAFISRWKKMQKEGAANTSLNSYGFYAYDTVWAVAHSIDKFMEEHNNITFSLHDSYKLLHTEGIGIQLEKLKVFNGGSDLVNILLQSNFTGVSGRIHFNSDRNIKSGGYDVININQMAINRVGHWSNSSGFSVVPPKVLTKKEHSRFSLDQKLDNITWPGGKTERPRGWVIADNAKPLRIGVPKRASFVEFVTEMQDSHQIQGYCIDVFKKALEFIPYEVPFVFKPVGNGKANPNYDALVKMVADNVYDGVVGDIAIVTNRTKIVDFSQPYISSSLVIVAPINNAKSNAWVFLKPFTADLWCVIAASFLMIGVVIWILEHRINDDFRGPPKRQLVTMFMFSLSTLFKTNQEKTVSSLSKMVMIVWLFLLMVITASYTASLTSILTVEKLSSPITGIDSLIASKSPIGYQIGSFAYSYLTDNLYVPRSRLVTLHSPEEYAEALRNGPSGGGVAAIIDELPYVELFLSKETEFGIIGQPFTKSSWGFAFQRDTPLALDMSTAILKLSEIGELRKIHEKWFCKMGCPEERKSNPKPDQLHLVSFWGLYLSCGVVSLAALVLYLLRMICQYARFKQKQKDIASSSSEQSSSHCSQVFVNFFNFIDEKEEAIKKMFTPCDNRHNPN* 1345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00862 1344 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 462 1300 IPR015683 -
Rops7g00862 1344 MobiDBLite consensus disorder prediction 1 22 - -
Rops7g00862 1344 FunFam Glutamate receptor 1138 1245 - -
Rops7g00862 1344 Gene3D - 577 854 - -
Rops7g00862 1344 CDD MATE_eukaryotic 45 449 IPR045069 GO:0042910|GO:1990961
Rops7g00862 1344 Gene3D - 893 1011 - -
Rops7g00862 1344 FunFam Glutamate receptor 1012 1149 - -
Rops7g00862 1344 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00862 1344 Pfam MatE 277 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00862 1344 FunFam Glutamate receptor 577 736 - -
Rops7g00862 1344 Gene3D - 480 829 - -
Rops7g00862 1344 SUPERFAMILY Periplasmic binding protein-like I 457 893 IPR028082 -
Rops7g00862 1344 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 475 491 - -
Rops7g00862 1344 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 535 563 - -
Rops7g00862 1344 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 666 689 - -
Rops7g00862 1344 Pfam Receptor family ligand binding region 479 838 IPR001828 -
Rops7g00862 1344 NCBIfam MATE family efflux transporter 55 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops7g00862 1344 Pfam Ligand-gated ion channel 1242 1273 IPR001320 GO:0015276|GO:0016020
Rops7g00862 1344 Pfam Bacterial extracellular solute-binding proteins, family 3 917 1241 IPR001638 -
Rops7g00862 1344 Gene3D - 1190 1248 - -
Rops7g00862 1344 Gene3D - 1012 1140 - -
Rops7g00862 1344 SMART GluR_14 900 1243 IPR001320 GO:0015276|GO:0016020
Rops7g00862 1344 CDD PBP1_GABAb_receptor_plant 463 858 IPR044440 -
Rops7g00862 1344 FunFam Glutamate receptor 896 1012 - -
Rops7g00862 1344 CDD GluR_Plant 899 1241 - -
Rops7g00862 1344 SUPERFAMILY Periplasmic binding protein-like II 880 1241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00862 Rops-Chr7 11541728 11556855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00862 457 1342 Ion Channels AT2G32400 57.015 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00862 K05387 - gmx:100796389 1479.54