Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00851 ATGGCGAGAATAATCTCCAATGACAACAACAATAATGAGGTCCCTGAGGCTGATACTACCGCACCAAAAGATGACGGCGAGGTGAGAACTCGCATGAAGAAAGGGCCTTGGACCCCACAAGAAGATATGATCTTGATGGAGTACGTGAGGAAGTATGGTGAAGGGAATTGGAACTCTGTGCAGAAGAATTCTGGGTTGTTAAGGTGTGGCAAAAGTTGCAGACTTAGATGGGCCAATCATCTAAGGCCTAATCTAAAGAAGGGTGCATTTTCTCAAGAAGAAGAACAAATCATCATCGACCTTCATTCTAAGATTGGAAACAAATGGGCTCGAATGGCTGCACAGCTACCTGGGAGAACTGACAATGAAATAAAGAACTTTTGGAATACCAGAATGAAAAGACGCCTGAGAGCAGGGTTACCCCTTTATCCCCCAGAAGTCCATGCAGAAGCCACCGCATACCACAATCATCTACACCAGCAGCACCACTTTGAGCAACCTTATCCTTCTTCATCATTACCATTTTCTTTACTCCTATCTTCTTGTTACCCTAAGAAGCTCAATGAGCCAAACCATTTTCCTGCTGCAAATCCTTTGCAAAACCAACCTGATTCTGCTAATCATTACACCAATCCAAGCCCGCAGTTCAACTTTTCCAATGAAAATAGAGGGAATGGAAACCTTGCTTTGCCATTATCACCTGTCTCTCCATATGGGTCTTCATCTTCGACCCTTTTCAACCAGAGTTTTGATTACCAATATTCTGGAAGCTATGATCATGGCTTGATAGCAGACGAACCCCTTCCTTTGGTGCCACAATCCACTAATGAGATCTCTCCGAGCCAATCCGCCACTCCTGCTTCATCCTATACTAGTGGTGTTGATGGCTTGATGGGAGCTTCAACCATGGTTAATGACTACTATGAAGTTACACCATTATCGCCTCAAAGAAACAGTGGCCTGTTAGATGCTTTGGTGGTGGAGGCTCAAAGTCTTTCTCGCAATGACAAGTCCAAAAGTGAGGATTCAACCTCAGCTGGGAAGTTGTCTCATAAGAGGAAAAACGTGATGGAAGCTGAGGAATATGCAGAGGAAGGAGACACTGTCCATGTGGTGTCAGCCATGAAGAAGAATACTGGGAACACTAGTAATGAAACCCAGAGGGATGATTTTAGCTCTTCTGGATTGTCAAAAGGGAAGAAACCAATTATGGAGGATCCATTGGAAGAGATGAATTCCATGGACGATGACTTGGTCAGCCTGCTCAACAATTTTCCCTCAGAAATGCCAATGCCTGAGTGGTACCGTAGAGGAGAAAGTCAATCATTGGGACTTGAAACTCAACAAGATGCTGCTTCACCTGGCCCCACTGATCAAGAATTTGCTTGGACTCTTGGAACTTGCTGGAACAATATGCCTGGCATATGTTAA 1431 0.4437 MARIISNDNNNNEVPEADTTAPKDDGEVRTRMKKGPWTPQEDMILMEYVRKYGEGNWNSVQKNSGLLRCGKSCRLRWANHLRPNLKKGAFSQEEEQIIIDLHSKIGNKWARMAAQLPGRTDNEIKNFWNTRMKRRLRAGLPLYPPEVHAEATAYHNHLHQQHHFEQPYPSSSLPFSLLLSSCYPKKLNEPNHFPAANPLQNQPDSANHYTNPSPQFNFSNENRGNGNLALPLSPVSPYGSSSSTLFNQSFDYQYSGSYDHGLIADEPLPLVPQSTNEISPSQSATPASSYTSGVDGLMGASTMVNDYYEVTPLSPQRNSGLLDALVVEAQSLSRNDKSKSEDSTSAGKLSHKRKNVMEAEEYAEEGDTVHVVSAMKKNTGNTSNETQRDDFSSSGLSKGKKPIMEDPLEEMNSMDDDLVSLLNNFPSEMPMPEWYRRGESQSLGLETQQDAASPGPTDQEFAWTLGTCWNNMPGIC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00851 476 SUPERFAMILY Homeodomain-like 31 128 IPR009057 -
Rops7g00851 476 MobiDBLite consensus disorder prediction 193 231 - -
Rops7g00851 476 MobiDBLite consensus disorder prediction 1 17 - -
Rops7g00851 476 CDD SANT 36 81 IPR001005 -
Rops7g00851 476 Gene3D - 33 86 - -
Rops7g00851 476 SMART sant 86 134 IPR001005 -
Rops7g00851 476 SMART sant 33 83 IPR001005 -
Rops7g00851 476 Gene3D - 89 136 - -
Rops7g00851 476 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Rops7g00851 476 MobiDBLite consensus disorder prediction 1 34 - -
Rops7g00851 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 81 IPR017930 -
Rops7g00851 476 MobiDBLite consensus disorder prediction 18 34 - -
Rops7g00851 476 MobiDBLite consensus disorder prediction 332 353 - -
Rops7g00851 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 136 IPR017930 -
Rops7g00851 476 MobiDBLite consensus disorder prediction 377 393 - -
Rops7g00851 476 FunFam Transcription factor GAMYB 89 135 - -
Rops7g00851 476 MobiDBLite consensus disorder prediction 194 231 - -
Rops7g00851 476 MobiDBLite consensus disorder prediction 377 403 - -
Rops7g00851 476 CDD SANT 89 130 IPR001005 -
Rops7g00851 476 FunFam MYB-related transcription factor 33 86 - -
Rops7g00851 476 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Rops7g00851 476 MobiDBLite consensus disorder prediction 334 353 - -
Rops7g00851 476 Pfam Myb-like DNA-binding domain 87 130 IPR001005 -
Rops7g00851 476 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Rops7g00851 476 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 19 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00851 Rops-Chr7 11378258 11381616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00851 32 476 MYB Transcription Factor Family AT2G32460 39.604 4.58e-77 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Rops7g00851 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00851 K09422 - gmx:100784779 639.032