Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00828 ATGAATAATTCTGGTTTGGGTGGTGGTTTTTTGTCTGGTCCAAATGGGGGGATTCTGGACCTGGAATCTACATTTCATAGGCACCAACAGACTCAGTTGGGTCATCCATCAGTAACTAATCAACAGCACATGAATGTTATGAGTGGTATGGAAAATGATCACCCAATTGACCTAATTGAAATGAAAAAGTTGAATGCGGGGTTGAATTTTGGTAAAGGAAAGGCATTTGCTCCTTCTAATCCTACTGCCAATAGTAATGACATGAGTGAAGATGATGAGCCAAGTTATGCAGAAGATGGGAATTGCGAGAACTTGGATGGTGGCAACAAGAGCAGAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGATAACGTGGTTGGGCTTCTTATATCAGTGGTGAGTTGTGTGGGTGATGATGGCACAGTTGGTGGCATGGATGGTGTTAAAAGGAAATCCGGGGTTTTACAGAAGAAGGGCAAGTGGAAAACGGTCTCCAAGATAATGATAAGCAAGGGTTGCCATGTTTCACCTCAACAATGTGAGGACAAATTCAATGACTTGAATAAAAGATACAAGAGGTTGAATGACATACTTGGAAGGGGAACTTGTTGCCAAGTTGTTGAGAATCCTGCCCTCTTGGATTCAATGCCTAACCTGTCAACTAAGGACAAGGAGGATGTTAGAAAGATACTAAGCTCAAAACACTTGTTTTTTAAGGAGATGTGTGCCTACCATAATGGGCAAAGGATATCAAATTGCCATGATCTTGACTTACAGGGTTATTCTTCTCTGGAACATGGGAGGGACTCGAGAGATAATAATGGCTCTGAGGACGAAGCTGAGGATAACAATGAAAGTGAGGATGATGAGATGGATAATGAAATTAATATCAATGCACATGGGGATGGAGAAAGGATGGGGGAGTTCTATGATAGAAATAAATCAAGTGAGGAGGATGGCCACTTTTGGCCACAATCTGTTGGGATGGATAACTTTGAGGCTGAAATGGCAAGGGTTTTTCAAGACCCCACAAAATCATTGAGGGAACGAAAAGAGTGGATTAAGATGCAGATGTTGCAGCTTCAAGAGCAAAATGTCAACTTCCAAGCTCAAGCTCTTGAACTTGAGAAACAACGGTTCAAGTGGTTAAGGTACTGTAGCAAGAAGGACAGGGAGCTGGAGAGGCTGAGGTTGGAGAACAAGAGAATGAAATTGGAAAATGAGTGCAGGATCTTGAAACTGAAGCAGAAAGAGCACGAGACAAATTGCAATAGGTCCGAGATGTCCTCAGACCCTGCCTCTCTTGGAATCAACAGGCTACGAGGGAGGGAGCACATCAACTTGGCCAGACAGCAGTAG 1362 0.4332 MNNSGLGGGFLSGPNGGILDLESTFHRHQQTQLGHPSVTNQQHMNVMSGMENDHPIDLIEMKKLNAGLNFGKGKAFAPSNPTANSNDMSEDDEPSYAEDGNCENLDGGNKSRKGSPWQRMKWTDNVVGLLISVVSCVGDDGTVGGMDGVKRKSGVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPALLDSMPNLSTKDKEDVRKILSSKHLFFKEMCAYHNGQRISNCHDLDLQGYSSLEHGRDSRDNNGSEDEAEDNNESEDDEMDNEININAHGDGERMGEFYDRNKSSEEDGHFWPQSVGMDNFEAEMARVFQDPTKSLRERKEWIKMQMLQLQEQNVNFQAQALELEKQRFKWLRYCSKKDRELERLRLENKRMKLENECRILKLKQKEHETNCNRSEMSSDPASLGINRLRGREHINLARQQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00828 453 Pfam Myb/SANT-like DNA-binding domain 119 244 IPR044822 -
Rops7g00828 453 Coils Coil 359 379 - -
Rops7g00828 453 Coils Coil 387 423 - -
Rops7g00828 453 PANTHER F16F4.11 PROTEIN-RELATED 2 425 - -
Rops7g00828 453 Gene3D - 122 194 - -
Rops7g00828 453 MobiDBLite consensus disorder prediction 265 306 - -
Rops7g00828 453 MobiDBLite consensus disorder prediction 76 117 - -
Rops7g00828 453 MobiDBLite consensus disorder prediction 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00828 Rops-Chr7 11057180 11059422 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops7g00828 Myb_DNA-bind_4 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00828 - - gmx:100798932 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00828 7 11057180 11059422 Rops7g00828 7 11057180 11059422 ECH