Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00827 ATGGCTGATAGACACCAGTACCCAACTGTTGTACAAAAATTTGCTGGCCAGCTTCATGTGAGATCCAGCATTTCCCCACATGTTGCAACTTGTTATGGAGGTTTGAAAAGGCCTGCTCTGTTGCAGAATCAATTTTCATTAGAGAATTATTCAAATACAGGGTTGCAGTATCCTGTCATGACTGCAACAAGCAAAGCTACAAGTGATTTGCATTCTGTAGGTTCAGCTGCTTCACCTGTGTTTGTTCCATCCCCATCAGAGAAAAACTTTGCAAGCTTTGCCACTGATTTTCTCATGGGTGGAGTTTCAGCAGCAGTGTCCAAATCTGCAGCTGCTCCTATTGAGCGTGTAAAGCTTTTGATTCAAAATCAAGATGAGATGATCAAGACTGGTCGGCTCTCCGGACCCTACAAGGGAATTGGAGATTGTTTTAGCAGAACAATCAAAGACGAGGGATTTGTTTCATTGTGGAGAGGGAACACTGTCAATGTTATTCGTTACTTCCCAACACAGGCCCTGAACTTTGCATTTAAAGACTACTTTAAGAAGCTATTTAACTACAAGAAAGACAGGGATGGATACTGGAAATGGTTTGCAGGAAACTTGGCATCTGGTGCTGCAGCAGGAGCTACATCTTCTGTCTTTGTTTACTCATTGGATTATGCTCGAACCCGGCTTGCCAGTGATGCCAAGGTTGTAAAGAAAGGTGGAGAGAGGCAATTCAATGGTTTGATCGATGTCTACAAGAAGACTCTTCAATCTGATGGTATTGCTGGCCTCTACCGTGGCTTCAACGTTTCTTGTGTTGGAATCATTGTCTACCGTGGTTTATATTTTGGAATGTATGATTCTCTCAAGCCAGTGCTCTTGGTAGGATCATTGCAGGATAGTTTCCTAGCTAGCTTTGCTTTGGGATGGATGGTTACTGTTGGTGCTAGTGTTGCCTCCTACCCCTTAGACACTGTTCGTAGAAGGATGATGATGACATCAGGTGAAGCTGTCAAATACAAGAACTCTTTCGATGCATTCTCACAAATAGTGAAGAAAGAAGGTCCAAAATCTCTCTTCAAGGGTGCTGGTGCAAACATCCTTCGTGCAGTTGCAGGTGCCGGTGTGCTTGCTGGCTATGACAAACTTCAGGTTCTTTTGCTTGGAAAGAAATATGGTTCTGGTGGTGCTTAA 1182 0.4349 MADRHQYPTVVQKFAGQLHVRSSISPHVATCYGGLKRPALLQNQFSLENYSNTGLQYPVMTATSKATSDLHSVGSAASPVFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKTGRLSGPYKGIGDCFSRTIKDEGFVSLWRGNTVNVIRYFPTQALNFAFKDYFKKLFNYKKDRDGYWKWFAGNLASGAAAGATSSVFVYSLDYARTRLASDAKVVKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVLLVGSLQDSFLASFALGWMVTVGASVASYPLDTVRRRMMMTSGEAVKYKNSFDAFSQIVKKEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLLLGKKYGSGGA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 96 109 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 211 229 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 159 179 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 109 123 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085
Rops7g00827 393 PRINTS Adenine nucleotide translocator signature 93 105 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 PRINTS Adenine nucleotide translocator signature 137 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 PRINTS Adenine nucleotide translocator signature 196 209 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 PRINTS Adenine nucleotide translocator signature 301 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 PRINTS Adenine nucleotide translocator signature 170 182 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 SUPERFAMILY Mitochondrial carrier 89 378 IPR023395 -
Rops7g00827 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 382 IPR018108 -
Rops7g00827 393 Gene3D Mitochondrial carrier domain 94 389 IPR023395 -
Rops7g00827 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 91 184 IPR018108 -
Rops7g00827 393 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 86 392 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g00827 393 Pfam Mitochondrial carrier protein 297 385 IPR018108 -
Rops7g00827 393 Pfam Mitochondrial carrier protein 195 289 IPR018108 -
Rops7g00827 393 Pfam Mitochondrial carrier protein 92 188 IPR018108 -
Rops7g00827 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 288 IPR018108 -
Rops7g00827 393 FunFam ADP,ATP carrier protein, mitochondrial 94 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00827 Rops-Chr7 11052176 11055672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00827 1 393 Antiporters AT5G13490 74.112 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00827 K05863 - gmx:100800843 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00827 7 11052176 11055672 Rops7g00827 7 11052176 11055672 ECH