Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00820 ATGGAGTACTCAGTGGAAGCTTTGGAGATAGATCTAAAGAACATGAGGAAGTATTATGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCATAATTTTCTCATTGAAAAAGAAGAAGAAATCTTGAAGGCCCTTAAGCAAGATTTGGGGAAGCATCATGCTGAGGCTTTTAGAGATGAGGTTGGAACGTTAATGAAGACCTTGAATTTTGCAAGGAAGAATTTGAAAAAATGGATGGCTGGCAAAGAGGCTAAACTTCCCATAATAGCACTACTTTCCACTGCAGAAATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAATTTTCCCTTTGGAATTTCCTTGGAGCCACTAATAGGAGCAGTAGCTGCTGGAAACACTGTAGTTCTAAAGCCTTCAGAGATGTCCCCTTCTTGTTCATCTCTTCTAGCCACTGCACTCCCAATTTACTTGGACAATAATGGCATTAAGGTTATTCAAGGTGGACCAGAAGTGGGTGAGCAACTCCTGCAACAAAGATGGGACAAGATTTTCTTCACAGGAAGTACAAGGGTGGGTCGGATTGTTATGTCTGCAGCAGTGGAGCATCTAACCCCTGTGACTTTGGAGTTAGGTGGAAAATGTCCTGCACTAGTTGATTCCCTTTCAGCTAATTGGGACAGAGAGGTGGCTGTGAAACGAATTTTGGTGGCAAAGTTTGGGTCTTGTGCAGGACAAGCATGCATAGCAATCGATTATATCCTTGTAGAAAAGAGTTTATGTTCTACATTGGTGACATTGATGAAGGAATGGATTAAGAAACTTTTTGGAGAAAACCCAAAAGCATCCAACTCTATTGCAAGGATAGTTAATAAAAAACATTTCTCAAGACTTCAGAATCTTCTCACTGAGCCTAAGGTCAAAGAATCGGTGGTTTTTGGTGGTTCCATGGATGAAGATAACTTGTTTGTGGAACCAACAATATTACTAGATCCGCCACTTGATTCAGCAATCATGGTAGAAGAAATCTTTGGCCCCCTGCTTCCAATTATAACCCTGGAGAAGATTGAAGATGGTATTGCATTCATAAACTCGAGGCCTAAACCTCTAGCAATTTATGCCTTCACAAAAAACAAAACTCTGCAGAGAAGAATGATATATGAAACATCATCTGGAAGTGTTGTATTCAACGATGCAATAGTACAATACATAGCGGATACCCTTCCATTTGGAGGAGTTGGGGAATGTGGATTTGGCAAGTACCACGGGAAATTCTCATTTGACACGTTCAGTCACCATAAGGCTGTGGGTAACAGAAGTTTCTACACTGATTTTTGGTTCAGGTTCCCTCCATGGACTCTCAACAAGCTCCAACTAATGGAGGCAGCTTACAATTTGGACTATCTTGGATTACTTCTTATCCTGCTCGGCTTAAAGAGATCAAAACGCTCATTACTTTAG 1473 0.41 MEYSVEALEIDLKNMRKYYGSGKTKEASWRESQLKGLHNFLIEKEEEILKALKQDLGKHHAEAFRDEVGTLMKTLNFARKNLKKWMAGKEAKLPIIALLSTAEIVPEPLGLVLIISSWNFPFGISLEPLIGAVAAGNTVVLKPSEMSPSCSSLLATALPIYLDNNGIKVIQGGPEVGEQLLQQRWDKIFFTGSTRVGRIVMSAAVEHLTPVTLELGGKCPALVDSLSANWDREVAVKRILVAKFGSCAGQACIAIDYILVEKSLCSTLVTLMKEWIKKLFGENPKASNSIARIVNKKHFSRLQNLLTEPKVKESVVFGGSMDEDNLFVEPTILLDPPLDSAIMVEEIFGPLLPIITLEKIEDGIAFINSRPKPLAIYAFTKNKTLQRRMIYETSSGSVVFNDAIVQYIADTLPFGGVGECGFGKYHGKFSFDTFSHHKAVGNRSFYTDFWFRFPPWTLNKLQLMEAAYNLDYLGLLLILLGLKRSKRSLL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00820 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Rops7g00820 490 FunFam Aldehyde dehydrogenase 217 420 - -
Rops7g00820 490 Pfam Aldehyde dehydrogenase family 23 440 IPR015590 GO:0016491
Rops7g00820 490 PIRSF ALDH 2 476 IPR012394 GO:0006081
Rops7g00820 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Rops7g00820 490 FunFam Aldehyde dehydrogenase 16 220 - -
Rops7g00820 490 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Rops7g00820 490 Coils Coil 42 62 - -
Rops7g00820 490 PANTHER ALDEHYDE DEHYDROGENASE 5 475 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00820 Rops-Chr7 10933862 10937636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00820 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 54.339 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00820 K00128 - gmx:100819197 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00820 7 10933862 10937636 Rops7g00820 7 10933862 10937636 ECH
Rops7g00820 7 10933862 10937636 Rops3g00727 3 8911335 8920720 PCT