Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00813 ATGGGAGCTTGTTGCTCTAAATTCTGTGTATGCTGTTGGTTCTCAAATACCAAATTGAATCTTCAAGACTTGCCTGAAAATGAAGATGGGAATAAGGGTGAGCAGAAGGATTTTTGGGGTGGCTTCACTGAGTACAGTTTTGACCAACTGAGAACTGCCACTTCAGGTTTTTCACCTGATAACATTGTCTCTGAACATGGTGAGAAGGCTCCCAACGTTGTCTACAAAGGAAGGATTGAAGATGATAGGTTGGTTGCTGTGAAGCGTTTCAACAAGTCTGCTTGGCCTGATTCTCGGCAATTCCTAGAGGAAGCAAGAGCAGTGGGGCAGCTGAGGAATGAGCGGTTAGCTAACTTGGTTGGTTGTTGTTGTGAAGGAGAAGAGAGATTGCTTGTTACTGAGTTTATGCCAAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAGACTCAGCCCATGAAATGGGAAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCATTGGAATACTGCAGCAGTAGAGGAAGGGCATTGTACCATGATCTCAATGCTTATAGAGTTTTGTTTGATGAGGATGGCAACCCTAGACTCTCTTGTTTTGGACTAATGAAAAACAGCAGAGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACCCCTCCAGAGTATTTGAGGACAGGAAGAATCACCCCAGAAAGTGTAATTTACAGTTTTGGAACACTTTTGCTTGATCTTCTGAGTGGCAAGCATATCCCACCCAGCCATGCCCTTGACCTTATTCGAGGCAAAAACTTTCTGTTGCTGATGGACTCTTGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGATGTTTGCAGTATGAACCTCGTGAGAGGCCAAATGCCAAGTCACTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTTCCATCAAAAGTTTTATTGGGCATACCGGATGAGAGCGCATCATCAAAGGAAACAGTTTCACTGACACCTTTTGGAGAAGCTTGTTCTAGAAGAGATCTCTTTTCAATACATGAAATTTTGGAAAGGGTGGGGTACAAGGATGATGAAGATGTTGCGAATGAGCTTTCCTTCCAAATGTGGACAGATCAAATACAAGAAACACTGAATTCGAAGAAGCAAGGCGATTCTGCTTTTCATGCCAGAGATTTCTCTACGGCCATTGAATCCTATACACAATTCATCGATGTTGGGACCATGGTATCACCAACTGTGTATGCAAGGCGCTGCTTATGTTATCTGATGAACAACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCACCCACCTGGCCTACTGCATTCTATCTTCAAGCAGTGGCTCTCTTCAGCCTTGGGATGGACAATGATGCACAAGAAAGTCTTAAAGATGGCACAACACTAGAAACCAGAAAGAATAGAAATTAA 1479 0.4293 MGACCSKFCVCCWFSNTKLNLQDLPENEDGNKGEQKDFWGGFTEYSFDQLRTATSGFSPDNIVSEHGEKAPNVVYKGRIEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVTEFMPNETLSKHLFHWETQPMKWEMRLRVALYLAQALEYCSSRGRALYHDLNAYRVLFDEDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVPSKVLLGIPDESASSKETVSLTPFGEACSRRDLFSIHEILERVGYKDDEDVANELSFQMWTDQIQETLNSKKQGDSAFHARDFSTAIESYTQFIDVGTMVSPTVYARRCLCYLMNNMAQEALGDAMQAQSISPTWPTAFYLQAVALFSLGMDNDAQESLKDGTTLETRKNRN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00813 492 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00813 492 SUPERFAMILY Protein kinase-like (PK-like) 36 316 IPR011009 -
Rops7g00813 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 12 491 IPR045845 GO:0004672|GO:0009742
Rops7g00813 492 Gene3D Transferase(Phosphotransferase) domain 1 137 329 - -
Rops7g00813 492 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Rops7g00813 492 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Rops7g00813 492 Gene3D Tetratricopeptide repeat domain 385 492 IPR011990 GO:0005515
Rops7g00813 492 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Rops7g00813 492 FunFam probable serine/threonine-protein kinase At4g35230 385 492 - -
Rops7g00813 492 FunFam probable serine/threonine-protein kinase At4g35230 32 135 - -
Rops7g00813 492 SUPERFAMILY TPR-like 389 489 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00813 Rops-Chr7 10857598 10861810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00813 45 311 Glycoside Hydrolase AT3G07070 33.559 1.15e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Rops7g00813 PK_Tyr_Ser-Thr 8.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00813 - - gmx:732542 883.634