Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00802 ATGCATGGATTATTAACTCTCCCTCTTCTTCCAAACACCTCGTTTTCTTGTCCTCACACTCTCCTTCTTCAACCATCTTCATGCCTCCTAAACCAAAAGTTAGAGACTTTCTCCATACCCAGTTGTAGAATTAGCTACGGAATTAGTTGTTTCAACCATTCACGCTGCTACAGAAGATACAACAGGAAACATGAGAAGAAAGGAAGAGGTAGCAATAGAGTCATGGTGGTGAGAGCAAGCCGTGGAGAGTCTCCATATGAAGTTTTGGGAGTATCTCCATCCGCAACCGTGGATGAAATCAAGAAGGCGTATCGGAAACTTGCCCTCAAGTATCACCCTGATGTCAATAAAGAGGATAAGGCACAGGAGAAATTCATGAGGATAAAACATGCATACAACACATTACTAAATTCTAGTTCCCGCAAAAAATATGATTCTGGAAACCGTGGTTGGGATTCAAGCCAAAGTAGAAATCCACAATCTGAAGAAGAATTTTATGGATTAGAGGACTTCTTTAGGGACCTTCAAGAAGAATTCAATAACTGGGAAGCCAATGCCGCTTCACAAGGAAAGCCAAAGAGCCTATGGGAGGAATTGGCAGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATTGTTGATCCAAATGACAATTATAAAACGAGTCAGGGAGGAAATCCATCTAACGTATCTGGGACTGAGACACCAAATAACGACACTCAAAGTGAAGCTAGCAAGGGAAACAAAAGCGTTGAGGATAACCTTGATGAAATAGAAGCCACTCTAGCTCAGTTAAAAAAGGAATTAGGCTTATAG 828 0.4094 MHGLLTLPLLPNTSFSCPHTLLLQPSSCLLNQKLETFSIPSCRISYGISCFNHSRCYRRYNRKHEKKGRGSNRVMVVRASRGESPYEVLGVSPSATVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRKKYDSGNRGWDSSQSRNPQSEEEFYGLEDFFRDLQEEFNNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNIVDPNDNYKTSQGGNPSNVSGTETPNNDTQSEASKGNKSVEDNLDEIEATLAQLKKELGL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00802 275 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Rops7g00802 275 Pfam DnaJ domain 85 145 IPR001623 -
Rops7g00802 275 SUPERFAMILY Chaperone J-domain 57 144 IPR036869 -
Rops7g00802 275 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Rops7g00802 275 MobiDBLite consensus disorder prediction 220 252 - -
Rops7g00802 275 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 52 211 - -
Rops7g00802 275 SMART dnaj_3 83 140 IPR001623 -
Rops7g00802 275 Coils Coil 252 272 - -
Rops7g00802 275 PRINTS DnaJ domain signature 86 104 IPR001623 -
Rops7g00802 275 PRINTS DnaJ domain signature 104 119 IPR001623 -
Rops7g00802 275 PRINTS DnaJ domain signature 120 140 IPR001623 -
Rops7g00802 275 MobiDBLite consensus disorder prediction 142 162 - -
Rops7g00802 275 CDD DnaJ 85 137 IPR001623 -
Rops7g00802 275 MobiDBLite consensus disorder prediction 220 259 - -
Rops7g00802 275 Gene3D DnaJ domain 82 189 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00802 Rops-Chr7 10757314 10761979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00802 86 146 C2H2 Transcription Factor Family AT1G74250 41.791 6.59e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00802 - - gmx:100793601 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00802 7 10757314 10761979 Rops7g00802 7 10757314 10761979 ECH