Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00797 ATGAGTTTCGTTTTCCGAGGGAGTAGGGGAGATATTGAAAGCGGATTTTCAGAATATGCCTCTGAAAGAACCACCATGCGTGTTCACCCATCTCGGCCAGTTCATAGCAATTCTCTGGCTTTTATTATTACAGTTCTTGTGCTATTCATGTTATTGAGTTCTCCTCAGATGTCACATTATCTCTTGCTCTGGCTTGTGATGGCTGTCTTTGCCATGGCTACAAGCCTGAGGATGTATGCAGCTTGTCAACACCTTCAAGCACAGGCCAGAGCTCATGCTGCTGCAGCCACTGGCTTGCTTGGCCATAATGAATTACGACTTCATGTGCCACCATCCATAGCAATTGCAACTAGAGGACGATTGCATGGACTTAGACTTCACCTTGCACTTCTTGATCGTGAATTTGATGAGCTAGATTATGACACTCTGAGAGCTCTGGACTCTGATACTGCTTCTATTACTCCTTCAATGTCCGAGGAAGAGATAAATGCCTTGCCTGTTCACACATATAAAATTGAAGTTCCAACAAAGGATAGCTCAGCAGGGTTGGCATCCTCCTCAAGTGCAGCTGAGATTAAACAAGACTCTGAAGGAACAGAGGGAAGTATCCAAGTTTCAGAAGATGAGCTGACATGTACCATATGCTTGGACCAAGTTAAGAAGGGGGAGCTTGTTCGTACCTTGCCATGCTTACATCAGTTTCATGCCAACTGCATTGACCCATGGCTCCGCCAACAAGCAACATGTCCAGTTTGTAAATTTAAGGTGGGGTCAGGATGGCGGGGAAATGGGGACAGTGACTCTGATGGTTCAGAGATTGTGTAG 825 0.4558 MSFVFRGSRGDIESGFSEYASERTTMRVHPSRPVHSNSLAFIITVLVLFMLLSSPQMSHYLLLWLVMAVFAMATSLRMYAACQHLQAQARAHAAAATGLLGHNELRLHVPPSIAIATRGRLHGLRLHLALLDREFDELDYDTLRALDSDTASITPSMSEEEINALPVHTYKIEVPTKDSSAGLASSSSAAEIKQDSEGTEGSIQVSEDELTCTICLDQVKKGELVRTLPCLHQFHANCIDPWLRQQATCPVCKFKVGSGWRGNGDSDSDGSEIV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00797 274 CDD RING-H2_PA-TM-RING 211 253 - -
Rops7g00797 274 SUPERFAMILY RING/U-box 207 257 - -
Rops7g00797 274 MobiDBLite consensus disorder prediction 179 203 - -
Rops7g00797 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 259 IPR013083 -
Rops7g00797 274 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Rops7g00797 274 SMART ring_2 212 252 IPR001841 -
Rops7g00797 274 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
Rops7g00797 274 Pfam Ring finger domain 211 253 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00797 Rops-Chr7 10709391 10714089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00797 1 274 C3H Transcription Factor Family AT3G55530 67.754 1.60e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00797 K16283 - gmx:100805406 405.216