Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00788 ATGCTTTATACAAACTCCTTTCTGCAAGATTTTCATGATCCTACCTCGGTATTCTCAAGTCAGAACCCAGTAACAAATGGGTTTGAGTTCGATAATTCAACTTCTCCTTCTTCTGGCACAACAAGCTCAAGTTCCTCTTCTTCTGGCACAAGCTCAAGTGGAGAATCCTCAGAAGTGACTAGATTTTCCGATAGCATCCTCAGATACATAAGCGACATCCTAATGGACGAGGAAGATGACTTGGAGAGCAAACCCTGCATGTTGCAGGATTGTTTAAGACTCCAGGCTGCTGAAAGATCATTCTATGACGTGCTTGGCCATAGCTATCCTTCATCACCCCATCAAAATGAAAGCATCAATAACGCAGACCAAGATGGAAATTATGGTCACACTTCAAGGTCTGGGAGCAATAGCAGCTGCACCACTGATAACTCATTTGAGTCTGAGTCTGTCAACATTTTGGGTGAATTTGACTCTTCTTTCCAACAACTACAAACCCCTCTAGTTGATTCCCTGGAAAAGACCTACGATGTAACTCCTGATCCGTTTAGGGGGTCACAAGCTGCTGGCCATTTTCACAATGAAACCTGGAATGTCATTCAGCAACAAAGCAAGGCAGTGATGGTAGAAGAAGGTTCAGCTTCAGCTCCCAGAGAAAAAAGAAGTCATCAGATGAATGATGCTTCCTATGAACAAGAGGGAAGAAGAGGTAGCAAAATTTCAGCTATCTTTTCTGATGATTTAGAGCCACCAGAGATCTTAGATGAGGTACTACTTTATCAGTCGGGAAAAAGTCAACACCCCTTATGTGCTGCTTCTGAACCATCACAGAATGTTGATTCCGAAGGAGGATCCAATGGAAAAGCAACACGTTCACGTTCAAAGAAAGGGTCCACCAAAAAGGGGGCAACTGTAGATTTGTGGACCTTGCTAACTCAATGTGCACAAGCAGTGGCAAGCCATGACCAAAGGAATGCAAATGACCTACTCAATCAGATTAGGCAACACGCTTCACCTTATGGGGATGGACTCCAGCGTTTAGCTCATTACTTTGCCAATGGCCTTGAGACAAGATTGGCTGCTGACACACCATCATATATGCCCCTAGATGTAGCAACTGCTGCAGATATGTTGAAAGCTTACAAATTATTCGTTACATCATCTCCTTTGCAGAGGATGTCAAATTTGTTGACAACCAGAACAATTATTAGTCTGGTGAAAAATGAGGGCACAGTTCATATTATTGACTTTGGCATTTGCTATGCTTTCCAATGGCCCTGCCTTATCAAAAGACTGTCAGAAAGACATGGTGGTCCTCCAAAGCTTCGTATTACAGGAATTGAACTTCCTCAGCCAGGATTTCGGCCTGCAGAAAGGGTGGAGGAGACAGGGCGGCGTCTGGAAAACTTCTGCAAGAAGTTCAATGTCCCATTTGAATACAATTGTCTTGCACAGAAATGGGAAACTATTAGACTTGAGGATCTCAAGATAGACAGGACAGAAATAACTGTTGTTAACTGTATGTACCGACTGAAGAATTTGCCTGATGAAACTGTGGCAGTGAACTGTCCAAGAGATGCTGTGTTGAAGTTGATCAGGAAGATCAATCCAAACATCTTCATCCATGGGGTTGTGAATGGCACTTATAATGCACCATTTTTCCTGACTCGGTTTAGGGAGGCACTCTACCACTTCTCATCAGTGTTTGATATGTTTGAGGCTAATGTGCCTCATGAAGACCCCCAAAGAGTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTTATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCCGAGACCTATAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGGTTCAAGCAACTCAGATTGGATCCTGAGTTGGTGAATCAAGCCAAAGTAATGGCGAAGAGGGAATATCATAAAGATTTTGTAGTTGATGAGGGTGGCAAATGGGTTTTGCAGGGATGGAAAGGGCGGATTCTTAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 2034 0.4376 MLYTNSFLQDFHDPTSVFSSQNPVTNGFEFDNSTSPSSGTTSSSSSSSGTSSSGESSEVTRFSDSILRYISDILMDEEDDLESKPCMLQDCLRLQAAERSFYDVLGHSYPSSPHQNESINNADQDGNYGHTSRSGSNSSCTTDNSFESESVNILGEFDSSFQQLQTPLVDSLEKTYDVTPDPFRGSQAAGHFHNETWNVIQQQSKAVMVEEGSASAPREKRSHQMNDASYEQEGRRGSKISAIFSDDLEPPEILDEVLLYQSGKSQHPLCAASEPSQNVDSEGGSNGKATRSRSKKGSTKKGATVDLWTLLTQCAQAVASHDQRNANDLLNQIRQHASPYGDGLQRLAHYFANGLETRLAADTPSYMPLDVATAADMLKAYKLFVTSSPLQRMSNLLTTRTIISLVKNEGTVHIIDFGICYAFQWPCLIKRLSERHGGPPKLRITGIELPQPGFRPAERVEETGRRLENFCKKFNVPFEYNCLAQKWETIRLEDLKIDRTEITVVNCMYRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGVVNGTYNAPFFLTRFREALYHFSSVFDMFEANVPHEDPQRVMLEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQLRLDPELVNQAKVMAKREYHKDFVVDEGGKWVLQGWKGRILNAFSAWVPA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00788 677 MobiDBLite consensus disorder prediction 268 300 - -
Rops7g00788 677 Pfam GRAS domain family 309 674 IPR005202 -
Rops7g00788 677 ProSiteProfiles GRAS family profile. 298 675 IPR005202 -
Rops7g00788 677 MobiDBLite consensus disorder prediction 109 145 - -
Rops7g00788 677 MobiDBLite consensus disorder prediction 214 234 - -
Rops7g00788 677 MobiDBLite consensus disorder prediction 268 292 - -
Rops7g00788 677 MobiDBLite consensus disorder prediction 211 237 - -
Rops7g00788 677 MobiDBLite consensus disorder prediction 22 59 - -
Rops7g00788 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 231 668 IPR005202 -
Rops7g00788 677 MobiDBLite consensus disorder prediction 107 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00788 Rops-Chr7 10626520 10628730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00788 62 676 GRAS Transcription Factor Family AT2G29060 45.455 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g00788 GRAS 7.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00788 - - aprc:113855970 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00788 7 10626520 10628730 Rops7g00788 7 10626520 10628730 ECH