Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00785 ATGATGACTTGGAGGCGAGAACACAAGGCATTTTGGTGGACAAAAAATTGTGGCAGTGGCAAGTCAACGCTCTTGAGGGCCCTCAACCGCCTCTGGGAGCCACCCTCCTCCTCCGTCTTCCTCGACGGCCACGACATCTCCGACCTCGACGTTCTCTCCCTCTGCCGTAAGGTTGGGATGCTCTTTCAGCTCCCTGCTCTCTTTGAAGGCACAGTTGCAGACAATGTTAGGTATGGTCCACAACTGAGAGGGAAAAAACTATCAGATGATGAGGTGCGTCAGTTGCTAATAATGGCAGACCTAGATGCTTCTTTCATGGACGAGTCCGGTGCTGAGCTCTCTGTGGGTCAAACTCAAAGAGTTGCACTTGCTAGGACTTTAGCTAATTCACCTGAGGTTTTGTTGTTGGACGAGCTAACTAGTGCGTTAGATCCAATATCCATAGAGAACATAGAGGATGCCCTGATGAAGCTGAACAAGAATAGGGGCATGACACTGATCATGATCTCTCATAGAGTCAAACAAATCCAGAGGATAGCTGACATAGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATCAACTCTCTGAAGCCCAGCATCCCACGGCACAAAGGTTTCTTGAACTCGGTTCTTAG 651 0.4869 MMTWRREHKAFWWTKNCGSGKSTLLRALNRLWEPPSSSVFLDGHDISDLDVLSLCRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLSDDEVRQLLIMADLDASFMDESGAELSVGQTQRVALARTLANSPEVLLLDELTSALDPISIENIEDALMKLNKNRGMTLIMISHRVKQIQRIADIVCLLVDGEIVEVLKPDQLSEAQHPTAQRFLELGS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00785 216 SMART AAA_5 5 190 IPR003593 GO:0016887
Rops7g00785 216 FunFam ABC transporter, ATP-binding protein 6 211 - -
Rops7g00785 216 Pfam ABC transporter 18 140 IPR003439 GO:0005524
Rops7g00785 216 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 6 213 IPR003439 GO:0005524
Rops7g00785 216 Gene3D - 16 213 IPR027417 -
Rops7g00785 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 202 IPR027417 -
Rops7g00785 216 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 18 214 IPR005670 GO:0005315|GO:0016020|GO:0035435
Rops7g00785 216 CDD ABC_PstB_phosphate_transporter 18 200 IPR005670 GO:0005315|GO:0016020|GO:0035435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00785 Rops-Chr7 10596448 10597098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00785 16 200 Calmodulin-binding Proteins AT2G36910 34.184 5.44e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00785 K02068 - gmx:100791365 322.783