Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00780 ATGGCTGTGGTCAGTGTGTTATGCATTGCATCTCTAATGTCCTTAATGTGGATGGTTGAGGCAAGAATTCCAGGGGTTTACACTGGAGGTGCTTGGCAAAGTGCCCATGCCACATTCTATGGTGGATCTGATGCTTCCGGCACCATGGGTATGTTATATAATAAGTATTATGTAATGGTGCCATGTAGAAAGCCCGGTGGGATCAGATTCACGATCAACGGTTTCCGTTACTTCAACTTGGTGCTGATTAGCAACGTTGCGGGTGCTGGTGATATCGTGCGCACCTATGTGAAAGGCTCACGAACGGGGTGGATGCCAATGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTTTTGGTGGGCCAGTCCTTGTCTTTCCGTGTTACCGCCAGTGACCGTCGCACTTCCACTTCTTGGAACATCGCTCCACCCAATTGGCAATTTGGTCAAACTTTCACTGGGAAGAATTTTCGTGTTTGA 486 0.4877 MAVVSVLCIASLMSLMWMVEARIPGVYTGGAWQSAHATFYGGSDASGTMGMLYNKYYVMVPCRKPGGIRFTINGFRYFNLVLISNVAGAGDIVRTYVKGSRTGWMPMSRNWGQNWQSNAVLVGQSLSFRVTASDRRTSTSWNIAPPNWQFGQTFTGKNFRV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00780 161 Pfam Expansin C-terminal domain 68 145 IPR007117 -
Rops7g00780 161 SUPERFAMILY PHL pollen allergen 64 156 IPR036749 -
Rops7g00780 161 Gene3D - 67 159 IPR036749 -
Rops7g00780 161 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 77 156 IPR007117 -
Rops7g00780 161 PANTHER EXPANSIN-A15 16 50 IPR002963 GO:0009664
Rops7g00780 161 PRINTS Expansin signature 142 158 IPR002963 GO:0009664
Rops7g00780 161 PRINTS Expansin signature 113 134 IPR002963 GO:0009664
Rops7g00780 161 PRINTS Expansin signature 78 99 IPR002963 GO:0009664
Rops7g00780 161 PRINTS Expansin signature 66 78 IPR002963 GO:0009664
Rops7g00780 161 FunFam Expansin 67 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00780 Rops-Chr7 10533134 10534721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00780 15 50 Expansin Gene Family AT2G39700 77.778 1.52e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00780 - - gmx:100811296 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00780 7 10533134 10534721 Rops3g00798 3 9730883 9733025 PCT