Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00773 ATGGGAAAGCACTTGCTTTCTTCCAAACAGCCCACTGTTCCAGTTCAGGACAGTAATCCAGGATGCATGTGGGGCATGCTTCAAATTCTTGATTATCATCATTGGCATGTCAAAAAGGTGTTTCCTCACAAAAAGAGAAGACATGCCAGATACAAGAGAAGAACCATTTTGAATTTCCAAGGTGAAGAAGACCAACAATATGGAGTTGCAGAATCAGAACCCCTCCTGGTCAGGCAACATAACAAAAAATTGGATGCTACAGGCAAAAGTTCTCCCAAAAATAGCAAAAAGGAACCACGCTCTCAAAAAAGGTTTAACGAAGAAATCTTTGAAGACTGTGGTACCATGGACTACTCAGGGAAAAACCAGGCCAGTAGTGAGCATGCACTTCATCTGGAAAAAGATGGCAAGACAAAAGAAGCTGCCCTTAACCATAAGCATATGGAAACAAACAAGCTTAACAGACACATTTCCAATAAATTTAAGGAGCATGTTGATGTTTTGGAGATAGTTAGTATGGAGAAGGATTTACTACTCAAATTTCTAAGAAATTTAGACGTCGATGGGAAAAACTTCCATCAAGCTTCCCACAACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTTTAACTGCATCTTCACAAATGAGAAACATTAGCTCTAGTACCTTCAAACACAAGCAAACCGAAATTTGGGCCTTCCCCAAGGGAGAAAAATTGCTTGTTGGTACTCAAGCACAAAAAAAGTCTGCACCCAGTTTCGTGAAAGATATTTCTTATGAGAAGCCAATGCCTTCAGTGAGTGATATTGGAGTAGATGGTGCCATGAAACAAAAACGAAGGATTTATTCAAGATCTTCTGAAGGGTTAAATCACAGAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTGGTTACCAAGCTTCTGTTGGCGCAATTTACCACAGAGCTTCACTTGAATATAGCGTCATCAATAATGAGATAGAGATCTTACAAAGCTTAGATGATGGCGTGATTCAAGATTCCAAAAAGAATAAAAGCTCGGATGAGACTAAAGTTTCTGAATATGATTCCAACAAACATGAAGTTCGCCTAATGCGAAGAACATCCTCTCTTAATGAATCGCTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGAAAAGACGTCAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAGGTTGACAAATGATGATAAGATTCAGAAGAGTGGACAAGCTCCAGTGTTTTCTAGAAGTAATTTGTCTATGCCTAATCTTGAGTCCTTAGGCTTCATTTTGCAGGAGGCACTTTATGATACAAATGATATAGGGAATACAGTGGAAACAGATTATGATGTTCAGAGAAAATCAGTGAGCCTTCCTTTAAAGATTGACAAATCACTTGATCATTTTAAAGAGGCTAAAATTGCAGAAACGGCAGAAGGGAGTGGCAGAGATGTGAATCTCAGTCTTTTATCTGATAAGATTGTGGATAAAATTGATGGAGTTACCTGTGACCAAAGGGAGGACACACATGAGCCAGCAGTGGAAGATGAAAGTTTCCCTCAAGGAAAAGAGGAAATAAGTATGACTACCTATCTTAGCAAGGAGGTGATAACATCACTTGAAACTAGCTGTGAAGACCATACAACCAGCCATGCAGAAGGTAAAGAATTGAATGCCCGAGGCTCTACCTTGGACGAGTTGGAGACCAATTTAGCAAATAGAGGAATTGTATATTCCTTGCCAGACTCTTTATCCAGCACAAATGCTAGTGTAACAGCCAAAGACACAAACAAGAGTCCTGAAAATCATTTCCTGCTGTTCAAATCAGATGCAGACAACAATTCCAATTTCAAATATGTGAAAGATGTTCTCGAATTTTCAGGCTTCATGGGAAATGAGCAGATTCAAATGCGATACTCAGTAGACCAGCCACTAAAGCCTTTGGATGCATCTTTGCACCATGAAATTGAATCATCTGGAGAAGAGATTATCAAACTCCATGATCACCAACTTCTTTTTAACTTAATTGACGAGGTGCTCCTTGAAATATATGAGAAGTCACCAACTTACTTCCCAAGACCCTTCTCCTTCAACCACCGCCTCCATCCAATGCCTAAAGGGAACTATCTCCTTAACCAAGTATGGACTAGTGTTAATTCATACCTGAGCTTGAGACCAGAGCTAGATCAGACATTAGATGATGTTTTGGGTCGTGATTTGGCAAACAGAAGTGGCTGGATGAACCTTCAACAGGAAGAGGAGAGTGTAACACTTGAACTAGAGGAGATGATCATGGAAGATTTATTAGATGAAATTATCTTCTCATAA 2388 0.392 MGKHLLSSKQPTVPVQDSNPGCMWGMLQILDYHHWHVKKVFPHKKRRHARYKRRTILNFQGEEDQQYGVAESEPLLVRQHNKKLDATGKSSPKNSKKEPRSQKRFNEEIFEDCGTMDYSGKNQASSEHALHLEKDGKTKEAALNHKHMETNKLNRHISNKFKEHVDVLEIVSMEKDLLLKFLRNLDVDGKNFHQASHNKARLTKSGSFPLTASSQMRNISSSTFKHKQTEIWAFPKGEKLLVGTQAQKKSAPSFVKDISYEKPMPSVSDIGVDGAMKQKRRIYSRSSEGLNHRGWNQLVLHQFKVIKQKIKHALVEFRKSGYQASVGAIYHRASLEYSVINNEIEILQSLDDGVIQDSKKNKSSDETKVSEYDSNKHEVRLMRRTSSLNESLDRYTQLFEKSFRKDVKWQSSKSKSLRLTNDDKIQKSGQAPVFSRSNLSMPNLESLGFILQEALYDTNDIGNTVETDYDVQRKSVSLPLKIDKSLDHFKEAKIAETAEGSGRDVNLSLLSDKIVDKIDGVTCDQREDTHEPAVEDESFPQGKEEISMTTYLSKEVITSLETSCEDHTTSHAEGKELNARGSTLDELETNLANRGIVYSLPDSLSSTNASVTAKDTNKSPENHFLLFKSDADNNSNFKYVKDVLEFSGFMGNEQIQMRYSVDQPLKPLDASLHHEIESSGEEIIKLHDHQLLFNLIDEVLLEIYEKSPTYFPRPFSFNHRLHPMPKGNYLLNQVWTSVNSYLSLRPELDQTLDDVLGRDLANRSGWMNLQQEEESVTLELEEMIMEDLLDEIIFS* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00773 795 Pfam Protein of unknown function (DUF3741) 144 183 IPR022212 -
Rops7g00773 795 MobiDBLite consensus disorder prediction 70 106 - -
Rops7g00773 795 Pfam Domain of unknown function (DUF4378) 637 791 IPR025486 -
Rops7g00773 795 PANTHER PROTEIN TRM32 1 795 IPR044257 -
Rops7g00773 795 MobiDBLite consensus disorder prediction 76 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00773 Rops-Chr7 10452492 10457479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00773 162 785 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.231 2.53e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00773 - - gmx:100784103 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00773 7 10452492 10457479 Rops7g00773 7 10452492 10457479 ECH