Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00771 ATGAAGCTTTTGAAACCTTCACACCCTCCTCACCCGCCCCATCATGCACCACCCACCTCGTCAATTTTGCACCTTGGCTTTCACGGGGTACCCTCTTCTTCTTCTCAATCTCAGATTCACATACCCCAACCTATGGAACAATGCGCCAAGGTTCATGTTGCCGTTGGAAAATCGCTTGAGAAAGCTGTCACCTTGCTTCAATGGACTTTCAACAAGTTTCCCAACACGGAAATTGTCTTAATTCATGCTTATCAGCCTTCTCTCATGATCCCCACTTTATTGGGGAAATTGCCAGCATCTCAGGCTAGTCCTGAAGTGGTGTCTGCTTTTCGAAGAGAGGAAGGAGAACAGACCAAGAGGGTTATAGACAAGTACTTAAGCATTTGCCGTGCAGCAAAGGTTAAGGCAAGTATTGTTGTAACTGAAGCTGACCAAGTCCAAAAAGGAATTGTTGATTTGGTTATTAGGCATAATATAAGGAAACTTGTGATTGGAGCAGTACCAGAAAATTGCATGAAAGTGAAAAGGAATTCCAGCAAAGCAAATTACACTGTCAAAAATGCTCCCTCATTCTGTGAAATTTGGTTTATCCATAAAGGTAAACACATTTGGACAAGAGAGGCTCTGGAAACACCATGTTCTTTGTCTTCGTGTGCCCAACCTGAGATTGTCACCACAGAAAGCTTGAGATGTAGATCTTTTCAATATGCTAAGAATGACTTATCCCACTTGGAATATCTTCAACCAAATTCTGCAAGAACTACAATATGTTCTGGAATTAAAAGTTGGACTCAAGGTGAAATAATTGAAACCGAAGCCACTTCTTCATCCATTTGTAGCAGTCATTGTTCCCCTCCAAATTTTGCTGGGGGTTATTTAGATAAATATTTAGAGGTCATGGAAGAAAGTGTTAACAGTCAGCGTATTGAAAGCAAAAGAGAAGCTGAGGCAGCAAAAGATGAGGCCTTTGCAGAGCGATTAAAGTGCAAGAGGTTGGAAGTTGAAGTCATGGAGGCCATAAGGAAGGTCAATTTGTTTGAATCTGCCCATGCACGTGAAGTAAAGCTCAGAAAAGAGGTTGAGGATGCACTGAGAGCTACAGTACAAGAACAACAAAAACTCTTGGATGAGAGTGAAGAAATTGCTGGTGAGCTACACATGACCATGAGAAATATTGCCCTGCTAGACAGTCGTGCTCAGGATGCAACCCGTAGGCGAGATGAAGCTGCAGATGAACTATCACTAATTCAAGCATCCATCTCAACCCTGTGGCAAGAAAGGCAGCAGATCAGGAGACAGAGAATGGAAGCCCTCCGCTGGCTTGAGCGGTGGAAAAGTCGTGGACAAATTGGAGCAGCTCATTACAATGGGGTCATTGGGTTTGCTGAAGAATTACCTGAACTAGCAGAATTTTCATTATCAGATCTTCAAAATGCCACATGTAATTTTTCCAATAGCTTTAAAATCTGGCAAGGTGGATATGGTTATATATATAAGGGGGAAATGTTGGGTAGGACTGTTGCTATAAAGAAGTTCCATCAACATAATGTGCAAGGACCAGCAGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTCCAGCATCCTCATTTATTGACTTTGCTAGGTGTTTGCCCTGAAGCCTGGTCAATTGTATATGAGTACCTCCCCAATGGAACTCTTCAAGACTATCTATTCCGAAAAAGCAACAATTCCCCTTTGACATGGAATACCCGAGCACGAATGATCGCTGAAATTGCTAGTGCAGTCTGCTTTTTACATTCTTCCAAACCTGAAACCATCATCCATGGTGATCTGAAGCCTGAAACTATACTTCTTGATTCTTCACTTAGTTGCAAGATATGTGAATTTGGGTTCTGCAGGCTGGTGACAGAGGAGTCTTTCTATCGTCCTAGTTTCTGCTTGAGCACTGAGCCAAAGGGTGCTTTCACATATACGGATCCAGAGTATCAAAGAACTGGAATGCTAACACCCAAGTCTGACATCTACTCCTTTGGCCTCATTATTTTGCAACTCCTCACTGGTAGGACACCGGTTGGATTAGCAGTTCTAGCACGCAATGCAGTTTTGTGTGGCAAATTGTCTCCAATTCTTGATTCTTCAGCTGGAGAATGGCCTTCGGCTGTGGCAAGACGATTGGTTGAACTGGGATTGCAATGCTGTCAACAAAATGGTAGAGACAGACCAGAGTTAACACCTACTCTAGTGAGAGAATTGGAGCAGTTGCATGTTTCAGAAGAGCGACCTGTGCCTTCTTTCTTCTTATGTCCAATCCTTCAGGAAATAATGCACGATCCTCAAGTTGCAGCTGATGGATTTACCTATGAAGGGGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACTTCTCCCATGACTAATTTAAAATTGAGTAACCTGCTTCTTACTTCAAATCATGCTCTTAGACTTGCCATCCAAGACTGGCTTTGCAAATGTTGA 2484 0.4271 MKLLKPSHPPHPPHHAPPTSSILHLGFHGVPSSSSQSQIHIPQPMEQCAKVHVAVGKSLEKAVTLLQWTFNKFPNTEIVLIHAYQPSLMIPTLLGKLPASQASPEVVSAFRREEGEQTKRVIDKYLSICRAAKVKASIVVTEADQVQKGIVDLVIRHNIRKLVIGAVPENCMKVKRNSSKANYTVKNAPSFCEIWFIHKGKHIWTREALETPCSLSSCAQPEIVTTESLRCRSFQYAKNDLSHLEYLQPNSARTTICSGIKSWTQGEIIETEATSSSICSSHCSPPNFAGGYLDKYLEVMEESVNSQRIESKREAEAAKDEAFAERLKCKRLEVEVMEAIRKVNLFESAHAREVKLRKEVEDALRATVQEQQKLLDESEEIAGELHMTMRNIALLDSRAQDATRRRDEAADELSLIQASISTLWQERQQIRRQRMEALRWLERWKSRGQIGAAHYNGVIGFAEELPELAEFSLSDLQNATCNFSNSFKIWQGGYGYIYKGEMLGRTVAIKKFHQHNVQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNSPLTWNTRARMIAEIASAVCFLHSSKPETIIHGDLKPETILLDSSLSCKICEFGFCRLVTEESFYRPSFCLSTEPKGAFTYTDPEYQRTGMLTPKSDIYSFGLIILQLLTGRTPVGLAVLARNAVLCGKLSPILDSSAGEWPSAVARRLVELGLQCCQQNGRDRPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLSNLLLTSNHALRLAIQDWLCKC* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00771 827 MobiDBLite consensus disorder prediction 1 23 - -
Rops7g00771 827 Pfam Protein tyrosine and serine/threonine kinase 489 739 IPR001245 GO:0004672|GO:0006468
Rops7g00771 827 SUPERFAMILY Protein kinase-like (PK-like) 467 743 IPR011009 -
Rops7g00771 827 Gene3D HUPs 45 192 IPR014729 -
Rops7g00771 827 Gene3D Phosphorylase Kinase; domain 1 460 555 - -
Rops7g00771 827 CDD RING-Ubox_WDSUB1-like 758 813 - -
Rops7g00771 827 ProSiteProfiles U-box domain profile. 756 827 IPR003613 GO:0004842|GO:0016567
Rops7g00771 827 CDD STK_N 50 200 - -
Rops7g00771 827 Gene3D Transferase(Phosphotransferase) domain 1 556 756 - -
Rops7g00771 827 Coils Coil 357 377 - -
Rops7g00771 827 Pfam U-box domain 757 826 IPR003613 GO:0004842|GO:0016567
Rops7g00771 827 ProSiteProfiles Protein kinase domain profile. 483 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00771 827 Coils Coil 392 412 - -
Rops7g00771 827 SUPERFAMILY RING/U-box 754 827 - -
Rops7g00771 827 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 66 189 - -
Rops7g00771 827 PANTHER OS02G0152300 PROTEIN 51 821 - -
Rops7g00771 827 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 757 826 IPR013083 -
Rops7g00771 827 SMART Ubox_2 760 823 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00771 Rops-Chr7 10421108 10425611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00771 50 824 U-box Gene Family AT2G45910 36.783 3.65e-172 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops7g00771 PK_Tyr_Ser-Thr 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00771 - - gmx:100788846 1305.04