Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops7g00766 | ATGGAGGTTGAGAAAGCAGATACAGTTCAGAAACTGATTGAGTTGGTGAATGAGATATCGGCGATTTCAGATTACAGGTGCACGGTAAAGAGAGAGTACTGCAACTTGGCACGGAGGTTGAAGCTCTTGATCCCATTGTTCGAAGAGATTAGGGACATCAAAGAGCCAATCCCTGAGGATACTTCAAAGGCCATGATTTTGTTAAAGCAAGCTATGGAATCGGCCAAGGAACTCCTCAGATTCGGGAGTGAAGGAAGCAATATTTACATGGTCCTTGAAAGGGACCAAATTATGAATAAATTCCACGAGGTGACTGCTCAGTTGGAACAAGCTTTGGGCGGAATTTCCTATGATAAACTTGACATATCTGATGAAGTTAAAGAGCAGGTTGAGCTTGTTCTTGCCCAGTTCAAAAGAGCCAAAGGAAGGGTTGATGCACCTGATGTTGAGTTGTATGAGGATCTCTTGTCTCTTTACAACAAAAGCAGTGATGCAGCTACAGATCCAGCTGTTCTACGGAGACTAGCTGAAAAATTGCAATTGATTGGAATAGCTGATCTTACACAGGAGTCAGTAGCTTTGCATGAGATGGTGGTTGCCAGTGGTGGGGATCCAGGGGCAAGCATTGAGAAGATGTCAATGTTATTGAAGAAGATAAAGGATTATGCCCAATCAGAAAATCTAAACATGGATGATAATGTAGGAAGAAACAGCCTTTATTCAAGTTGCTGTAAACCAGGAGCAAATGAAAAGAATCACCACCCCCCTGTAATCCCTGATGATTTTCGATGTCCAATTTCCCTAGAATTGATGAAGGATCCTGTCATTGTATCATCAGGACAGACTTATGAGCGTTCTTGTATAGAGAAGTGGTTGGAAGCAGGGCACGGTACATGCCCAAAAACACAGCAGACCCTCTCTAGTACTGTTCTCACACCCAACTATGTCTTACGAAGCCTCATAACACAATGGTGTGAAGCCAATGGCATAGAACCACCAAAACGACCTAGCAGTTCTCGACCTAGTAAATCAGCATCTGCCTGCTCACCAGCTGAGCGAAGTGAGATTGAAAATCTTCTTAGAAAGCTTGCATCTGGCAATCCTGAAGACCAGAGATCAGCTGCAGGTGAGATCCGCCTGCTTGCAAAGCGTAATGCAGATAACCGTGTGGCCATTGCTGAAGCTGGTGCAATACCTCTTCTTGTTGGTCTTCTCTGTTTGCCTGATTCCCGCATTCAAGAGCATGCTGTTACAGCACTTCTGAATCTTTCCATATGTGAAAATAACAAAGGAAGTATCATATCTTCTGGGGCAGTTCCAGGTATAGTTCATGTGCTCAAGAAGGGAAGCATGGAAGCTCGGGAAAACGCGGCAGCAACTCTTTTTAGCCTTTCAGTTATAGATGAAAATAAGGTTACAATTGGTTCATTAGGAGCCGTACCACCATTAGTGACATTGCTGAATGAGGGTACACAAAGGGGTAAGAAAGATGCTGCGATGGCACTCTTCAATTTGTGCATTTACCAGGGTAACAAGGGAAAGGCTGTGAGGGCTGGTGTTGTTCCTACACTGATGCGACTGCTGACAGAACCTGGTGGGGGAATGGTGGATGAAGCCTTGGCAATTTTGGCAATATTGGCTAGCCATCCTGATGGGAAGATTGCCATTGGTGCTGCAGAGGCAGTGCCTGTTTTGGTAGAGGTTATTGGGAATGGATCTCCAAGGAACAAAGAGAATGCAGCTGCCGTCTTAGTGCACCTTTGTTCTGGAGATCAACAATATATAGCTCAGGCCCGGGAGGTAGGGGTGATGGGTCCATTGTTGGAATTGGCTCAAAATGGCACAGATAGAGGTAAAAGAAAGGCTGCACAATTGCTCGAGCGAATGAACAGGTTCCTTGAGCAACGGGAGGAAGTTCAAACGCAAGCTGTACTTGAAGCTCAGAACCAGGATATGCCACTGCCTTCTATTTCGAACCTTGATGATAGCTAA | 1992 | 0.4498 | MEVEKADTVQKLIELVNEISAISDYRCTVKREYCNLARRLKLLIPLFEEIRDIKEPIPEDTSKAMILLKQAMESAKELLRFGSEGSNIYMVLERDQIMNKFHEVTAQLEQALGGISYDKLDISDEVKEQVELVLAQFKRAKGRVDAPDVELYEDLLSLYNKSSDAATDPAVLRRLAEKLQLIGIADLTQESVALHEMVVASGGDPGASIEKMSMLLKKIKDYAQSENLNMDDNVGRNSLYSSCCKPGANEKNHHPPVIPDDFRCPISLELMKDPVIVSSGQTYERSCIEKWLEAGHGTCPKTQQTLSSTVLTPNYVLRSLITQWCEANGIEPPKRPSSSRPSKSASACSPAERSEIENLLRKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLCLPDSRIQEHAVTALLNLSICENNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSLGAVPPLVTLLNEGTQRGKKDAAMALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPDGKIAIGAAEAVPVLVEVIGNGSPRNKENAAAVLVHLCSGDQQYIAQAREVGVMGPLLELAQNGTDRGKRKAAQLLERMNRFLEQREEVQTQAVLEAQNQDMPLPSISNLDDS* | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops7g00766 | 663 | MobiDBLite | consensus disorder prediction | 331 | 350 | - | - | |
Rops7g00766 | 663 | FunFam | RING-type E3 ubiquitin transferase | 341 | 492 | - | - | |
Rops7g00766 | 663 | FunFam | RING-type E3 ubiquitin transferase | 5 | 118 | - | - | |
Rops7g00766 | 663 | SMART | Ubox_2 | 261 | 324 | IPR003613 | GO:0004842|GO:0016567 | |
Rops7g00766 | 663 | SMART | arm_5 | 549 | 589 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SMART | arm_5 | 591 | 631 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SMART | arm_5 | 426 | 466 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SMART | arm_5 | 508 | 548 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SMART | arm_5 | 385 | 425 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SMART | arm_5 | 467 | 507 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | Gene3D | - | 337 | 651 | IPR011989 | - | |
Rops7g00766 | 663 | FunFam | RING-type E3 ubiquitin transferase | 258 | 331 | - | - | |
Rops7g00766 | 663 | CDD | MLKL_NTD | 10 | 138 | - | - | |
Rops7g00766 | 663 | CDD | RING-Ubox_PUB | 259 | 311 | IPR045210 | - | |
Rops7g00766 | 663 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 396 | 438 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | Coils | Coil | 622 | 642 | - | - | |
Rops7g00766 | 663 | SUPERFAMILY | ARM repeat | 356 | 638 | IPR016024 | - | |
Rops7g00766 | 663 | MobiDBLite | consensus disorder prediction | 335 | 350 | - | - | |
Rops7g00766 | 663 | Pfam | Armadillo/beta-catenin-like repeat | 385 | 424 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | Pfam | Armadillo/beta-catenin-like repeat | 550 | 589 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | Pfam | Armadillo/beta-catenin-like repeat | 468 | 506 | IPR000225 | GO:0005515 | |
Rops7g00766 | 663 | SUPERFAMILY | RING/U-box | 250 | 334 | - | - | |
Rops7g00766 | 663 | Pfam | U-box domain | 258 | 328 | IPR003613 | GO:0004842|GO:0016567 | |
Rops7g00766 | 663 | ProSiteProfiles | U-box domain profile. | 257 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
Rops7g00766 | 663 | PANTHER | U BOX DOMAIN-CONTAINING | 30 | 631 | - | - | |
Rops7g00766 | 663 | FunFam | RING-type E3 ubiquitin transferase | 532 | 651 | - | - | |
Rops7g00766 | 663 | Gene3D | - | 3 | 117 | IPR036537 | GO:0007166 | |
Rops7g00766 | 663 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 258 | 331 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops7g00766 | Rops-Chr7 | 10348910 | 10353777 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops7g00766 | 1 | 639 | U-box Gene Family | AT3G46510 | 72.031 | 0.0 | 931 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops7g00766 | - | - | pcin:129314694 | 1047.34 |