Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00765 ATGGTTTTCTCTTCTATTCCAACCTATTTAGATCCTCCCAACTGGCAGCAACAACAGAATCAACATCAAGCAAATGACACTGCAAGTTCTCAGTTGCTTCCTCCGTTACCCCAACAGCCACTTACTTATGTGGGAGGTGGTGCGGGCTCAATCAGGCCCGGGCCTATATCTGATCGGGCTCAGGCTCAACTAGCCAAGATACAACCACCTGAGGCAAGTCTAAAGTGTCCTCGTTGTGAATCCACCAACACTAAATTTTGCTACTTCAACAATTACAGCCTCTCTCAACCTAGACACTTCTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCTCTCAGGAATGTTCCTGTTGGTGGAGGATACCGTAGGAACAAGAAGAACAAAAGGAGGAGTCGCTCTGAATCTCCTGTATCTACTGACAAACAATCACTTTCCAATTCCACAAGTGCAATCCCTTCTTCCTTCACCCCTGAGCTTTTTCCAACTAACCGACCTTACATGACCTCTCTTCAGAATCTGAGTCGCTGTGGCGTTGGAAACATGGGCCTCACGAACTTGCGTGAGATCCAAGCACAGAATGCTCATATGGGGTTTCAAATTGGAGGTCATGGTTCAACTTCAGATGGAGGAGTGAATCAGTGGCGTTTTCAGCAGTTTCCTTTCTTGAATGGTTTTGATTCATCAACTTCATCTGTTTCATACCCATTTCAAAGTGGGAGTGTTGAAGCACCATCTGGTTTGGTTGGAGATATTGCAGCCACGTCTAGGGTTAATCAGATTAAATTGGAATACAACGGAGGTCTAAATTTGTCAAGATCTCCTGTGAGGAACTCAGAAAATAACCATTACAATTCATGGACCGATTTATCTGCGCTTGCCTCATCTTCCACTACTCATCTTTTGTAA 912 0.4496 MVFSSIPTYLDPPNWQQQQNQHQANDTASSQLLPPLPQQPLTYVGGGAGSIRPGPISDRAQAQLAKIQPPEASLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGYRRNKKNKRRSRSESPVSTDKQSLSNSTSAIPSSFTPELFPTNRPYMTSLQNLSRCGVGNMGLTNLREIQAQNAHMGFQIGGHGSTSDGGVNQWRFQQFPFLNGFDSSTSSVSYPFQSGSVEAPSGLVGDIAATSRVNQIKLEYNGGLNLSRSPVRNSENNHYNSWTDLSALASSSTTHLL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00765 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 215 IPR045174 GO:0003700|GO:0006355
Rops7g00765 303 MobiDBLite consensus disorder prediction 115 158 - -
Rops7g00765 303 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
Rops7g00765 303 MobiDBLite consensus disorder prediction 11 30 - -
Rops7g00765 303 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Rops7g00765 303 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Rops7g00765 303 MobiDBLite consensus disorder prediction 139 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00765 Rops-Chr7 10339834 10341341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00765 18 302 C2C2-Dof Transcription Factor Family AT3G55370 39.873 3.39e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Rops7g00765 zf-Dof 4.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00765 - - ccaj:109798892 348.206