Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00748 ATGCCGATTACCAGAATTGCCATCGGAAATCCTTCAGAGTTCGGCCAAGTCGATGCACTTAAGGCTGCCCTCGCTGAGTTCATCTCGATGCTCATCTTTGTTTTTGCTGGAGAAGGCTCTGGCATGGCTTTTAATAAGCTCACAAACAATGGTTCAGCAACACCAGCTGGGCTAGTGTCAGCATCACTGTCACATGCCTTTGCTCTTTTTGTGGCTGTCTCTGTTGGTGCTAACATTTCTGGTGGTCATGTCAACCCTGCTGTCACTTTTGGTGCCTTTGTTGGTGGCCACATTACTTTCTTTAGAAGCATTTTGTACATTATTGCTCAGTTGCTTGGCTCTATTGTTGCTTGCTTGCTCCTTAAAATTGCCACTGGTGGAATGGAAACATCTGCATTTGCACTGTCTGCTGGGGTTGGAGCAGCGAATGCTCTAGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACTGTGTATGCAACTGCAGTGGATCCAAAGAAGGGTGATATTGGGATAATTGCTCCAATTGCAATTGGTTTTATTGTTGGTGCTAACATCTTGGCTGGTGGTGCATTTGATGGTGCATCCATGAACCCTGCAGTGTCTTTTGGGCCTGCTGTTGTTAGCTGGTCATGGGCTAACCACTGGGTTTACTGGGCCGGCCCATTCATTGGTGCTGCCATTGCTGCTCTTGTCTACCAGATTTTCTTAATTAGCCCAACTACTCATGAACAGCTCCCTTCCACGGATTATTAG 759 0.4625 MPITRIAIGNPSEFGQVDALKAALAEFISMLIFVFAGEGSGMAFNKLTNNGSATPAGLVSASLSHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFFRSILYIIAQLLGSIVACLLLKIATGGMETSAFALSAGVGAANALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWSWANHWVYWAGPFIGAAIAALVYQIFLISPTTHEQLPSTDY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00748 252 SUPERFAMILY Aquaporin-like 17 245 IPR023271 -
Rops7g00748 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Rops7g00748 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
Rops7g00748 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00748 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Rops7g00748 252 FunFam Probable aquaporin TIP1-1 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00748 Rops-Chr7 10099914 10101085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00748 1 252 Major Intrinsic Protein MIP AT4G01470 78.175 6.29e-140 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00748 K09873 - gmx:547794 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00748 7 10099914 10101085 Rops3g00834 3 10182352 10183519 PCT