Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00729 ATGTCCATGTATGCACCATCTAACATCTCATTCTCACGCGCCACCACTACATCACCCTTTCCCTCACCTTCCCCACTAATGCACCACCACCCCTTCTCCGACCTCACCGAGTTTGACTCGCTACAAGAGACTCTGTCCCAACTCTACAACTCGGAGAACAATAACAACAGTTGTAGCAGTGCTTATAGCAGCTACGGTGGGTCACCCTCACCATCCACTTCCACCTTGATACAGAGGAGCGTTAGCACCCATTCCCTCCACAATAATGGGCCCCACCACCGCCCCCTTTCTTCTCTCTTCGCTGAGTTGCTTGACTCGGAGGACGCTCCTGTTAGGAGAGTTTACAGTACCGGTGATCTACAGAGGATTAATGAAATGCCACATAATCATCATTCGGATAGTCCATTGTCAAGCGAAAGTAGTATGATTATAGAAGGGATGAGCAGAGTTTGTCGATATAGCCCTGAAGAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGAAAAACATTGGCAGATAGCAGGCCACGCATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAAACATACAATTCAGTGGAGCCACTTTGGTGCTGGAGAGGAAGAGGATGAGGAAGATGAGAATTGGGTCAGTATCTTTGATTCCATAGTTGCTGCAAATCTTGCTGAAGAGTCTCAAGGCAGTTCCTCCTTTGGTCTATTGTATTAG 762 0.4646 MSMYAPSNISFSRATTTSPFPSPSPLMHHHPFSDLTEFDSLQETLSQLYNSENNNNSCSSAYSSYGGSPSPSTSTLIQRSVSTHSLHNNGPHHRPLSSLFAELLDSEDAPVRRVYSTGDLQRINEMPHNHHSDSPLSSESSMIIEGMSRVCRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKKHTIQWSHFGAGEEEDEEDENWVSIFDSIVAANLAEESQGSSSFGLLY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00729 253 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 51 219 IPR045281 GO:0009909
Rops7g00729 253 MobiDBLite consensus disorder prediction 1 23 - -
Rops7g00729 253 Pfam CCT motif 160 200 IPR010402 GO:0005515
Rops7g00729 253 MobiDBLite consensus disorder prediction 1 28 - -
Rops7g00729 253 ProSiteProfiles CCT domain profile. 158 200 IPR010402 GO:0005515
Rops7g00729 253 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00729 Rops-Chr7 9752201 9754556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00729 154 206 C2C2-CO-like Transcription Factor Family AT5G15850 47.170 5.98e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops7g00729 CCT 9.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00729 - - ccaj:109806671 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00729 7 9752201 9754556 Rops7g00729 7 9752201 9754556 ECH
Rops7g00729 7 9752201 9754556 Rops3g00868 3 10710910 10713225 PCT