Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00726 ATGGAGCAGTCGAAGAAATCATCGTTGAGAACATCATTTCCCAGAGACCCTCGTGGGTCCCTTGAGGTGTTCAACCCAACAGTAACAACCAACTCGAACTCTTCGATTCGTTCTCAGCCAATCTGGAAGCCTTTGCCGGAGACGGAAGAACCACCACTCAACCCTTCCTCCGATGAGGTCGTCACCACCACCACCACCACCTCCTCCTTTATGGCACTCAAGGAAGAACCAGGCGCGGCGGCGCAGAGAGCCGCCGAATGGGGTTTGGTACTCAAAACAGACACCGAAACCGGAAAGCTGCAAGGAGTGACTGTTCGGAACTCCGGCGGGGACGAACTAAATGCCAAACTCGCCGGTTTTTCTACTTCCAGAAGAAACTCCAATAACTCCATCAGAACCTCCGGCGACTCTTCGGACGGCGGAGAATCACGTGGGATTCCGAGAATTTCAGAGGACTTGAAGGACGCTTTGTCAGCGTTTCAACAAACTTTCGTGGTTTCCGATGCTACCCGACCCGATTACCCGATCATGTATGCCAGTGCCGGATTCTTCAAAATGACGGGTTATACATCAAAGGAAGTCATAGGGAGAAACTGTCGGTTTTTACAGGGTGCGGATACGGATCCTGATGACGTGGCAAAGATAAGGGAAGCGTTGGAAGCAGGGAAAAGTTACTGTGGAAGATTACTGAATTATAAGAAGGACGGGACTCCCTTCTGGAACCTTCTCACTATTTCACCCATCAAGGACGATGATGGGAAAGTTATCAAATTTATCGGGATGCAAGTGGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAAAAGACACTGCGTCCCAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACAACTTCAGTATCTGAGTTGGTACAAGCAGTGAAGCGCCCCCGAGCATTCAGTGAATCGGGAAACCGTCCCTTTATCAGAAAATCAGAAGTTGTTGAAGAAGAAGAAGAGGAAGAGAAAGTAGAAAAAATATTAAGGAGAAAATCTGAGAGTGTTAAACGGGAATCACAAGGAAAAAATAGAAATTCAATGCAGCGAATCAGTGAGCTGCTGCCTGAAAATAAACAGAAGAACTCTCATCGTCGTTCTTTCATAGGGTTCATCAGGAAAAGTCAGTCCAATGATGAAATCATCAATAATGAAGTTATTGAGGACGTGAGCTCTGAAAGTGAGGATGATGAGAGGCCTGCTGATAGTTTTGAAGTAGATGAAAAAGAAAAGCAGAGGGTAAAGCGAAAAGGTCTTGATCTTGCTACCACACTTGAGCGTATTGAAAAAAACTTTGTAATTACTGATCCAAGGCTTCCTGACAATCCTATAATATTTGCATCTGATAGCTTCTTGGAGCTTACAGAATATAGTCGTGAAGAAATATTGGGAACAAATTGCAGGTTCCTGCAAGGACCTGAAACTGATCCAGCAACTGTGCAAAAAATCCGAGAGGCAATTGACAGCCAAACAGAAGTTACCGTGCAACTCATTAATTATACAAAGAGTGGAAAAAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCATAAGGGAGAAGTACAATATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCACAACTGCATCGCAGAAGAAACTGCAAAGGACGGAGAACAATTGGTCAAACAAACTGCAGAAAATGTTGATGAGGCAGCGAGAGAACTTCCGGATGCTAATTTGAAACCAGACGATTTATGGATAATTCATTCGAAAATGGTTCACCCCAAACCTCATAGGAAGGATGATGCTTCTTGGAGAGCTATCCAGAAGATCCGAGAAAGTGGAGAACAGATAGGCCTAAAGCACTTTAGGCCAATTAGACCTTTGGGGTCAGGAGATACTGGCAGTGTGCATCTGGTGGAGCTATGTGGAACTGGTCAATATTTTGCCATGAAGGCTATGGATAAAGGTGTTATGCTCAATCGAAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTGCCTGCATTATATGCATCCTTTCAGACCAAAACACATGTTTGTTTGATAACCGATTACTGTCCTGGTGGAGAGCTATTCCTGCTTCTTGACCGTCAGCCAACAAAGGTTCTCAAGGAAGACGCCGCGAGATTTTATGCTGCTGAGGTAGTGATTGCGTTGGAGTACCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTAATCCAGAGCAATGGGCATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGCTTATAACTCCATCTACAAATGAAAAGAAGAAGAAGAAGAAGAAACAACAGAAAAGTCAACAGCTTCCAATGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATCGCTCCGGAAATTATAACCGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTTTTTGGGTATACGCCATTCAGGGGAAAGACAAGACAAAAAACATTTGCAAATATTCTTCACAAAGATCTTAAATTTCCCAAAAGCAAACCGGTAAGTCTCCATGCAAAGCAGCTAATTTACTGGTTGTTGCACAGAGATCCCAAAAGCAGATTGGGTTCACAGGAAGGATCAAATGAAATTAAGCGTCATCCATTCTTCCGGAGTGTCAATTGGGCACTAGTTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTATCTTACTGGAAACTGAAGAAGAAAAAGAAACCAAAGATGTAGACCCCGGGTTTGGACCCGCTTCAGTGGTGTAA 2898 0.4406 MEQSKKSSLRTSFPRDPRGSLEVFNPTVTTNSNSSIRSQPIWKPLPETEEPPLNPSSDEVVTTTTTTSSFMALKEEPGAAAQRAAEWGLVLKTDTETGKLQGVTVRNSGGDELNAKLAGFSTSRRNSNNSIRTSGDSSDGGESRGIPRISEDLKDALSAFQQTFVVSDATRPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPDDVAKIREALEAGKSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVIKFIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKATTSVSELVQAVKRPRAFSESGNRPFIRKSEVVEEEEEEEKVEKILRRKSESVKRESQGKNRNSMQRISELLPENKQKNSHRRSFIGFIRKSQSNDEIINNEVIEDVSSESEDDERPADSFEVDEKEKQRVKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGTNCRFLQGPETDPATVQKIREAIDSQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIAEETAKDGEQLVKQTAENVDEAARELPDANLKPDDLWIIHSKMVHPKPHRKDDASWRAIQKIRESGEQIGLKHFRPIRPLGSGDTGSVHLVELCGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQLITPSTNEKKKKKKKQQKSQQLPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLFGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLIYWLLHRDPKSRLGSQEGSNEIKRHPFFRSVNWALVRCMKPPELDAPILLETEEEKETKDVDPGFGPASVV* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00726 965 MobiDBLite consensus disorder prediction 946 965 - -
Rops7g00726 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Rops7g00726 965 CDD PAS 176 265 IPR000014 -
Rops7g00726 965 MobiDBLite consensus disorder prediction 396 422 - -
Rops7g00726 965 FunFam LOV domain-containing protein 630 714 - -
Rops7g00726 965 PANTHER FLIPPASE KINASE 1-RELATED 285 941 - -
Rops7g00726 965 ProSiteProfiles PAC domain profile. 223 277 IPR000700 -
Rops7g00726 965 ProSiteProfiles PAC domain profile. 504 558 IPR000700 -
Rops7g00726 965 NCBIfam PAS domain S-box protein 176 269 IPR000014 -
Rops7g00726 965 NCBIfam PAS domain S-box protein 455 545 IPR000014 -
Rops7g00726 965 Pfam PAS domain 453 545 IPR000014 -
Rops7g00726 965 Pfam PAS domain 170 266 IPR000014 -
Rops7g00726 965 FunFam Putative LOV domain-containing protein 163 319 - -
Rops7g00726 965 Gene3D PAS domain 163 318 - -
Rops7g00726 965 SUPERFAMILY PYP-like sensor domain (PAS domain) 170 262 IPR035965 -
Rops7g00726 965 ProSiteProfiles PAS repeat profile. 149 220 IPR000014 -
Rops7g00726 965 SMART pac_2 507 549 IPR001610 -
Rops7g00726 965 SMART pac_2 226 268 IPR001610 -
Rops7g00726 965 Gene3D PAS domain 418 583 - -
Rops7g00726 965 Pfam Protein kinase domain 633 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00726 965 ProSiteProfiles Protein kinase domain profile. 631 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00726 965 SUPERFAMILY PYP-like sensor domain (PAS domain) 446 545 IPR035965 -
Rops7g00726 965 ProSitePatterns Protein kinases ATP-binding region signature. 637 660 IPR017441 GO:0005524
Rops7g00726 965 MobiDBLite consensus disorder prediction 119 147 - -
Rops7g00726 965 Coils Coil 562 582 - -
Rops7g00726 965 ProSiteProfiles PAS repeat profile. 430 503 IPR000014 -
Rops7g00726 965 MobiDBLite consensus disorder prediction 23 41 - -
Rops7g00726 965 MobiDBLite consensus disorder prediction 402 416 - -
Rops7g00726 965 FunFam Putative LOV domain-containing protein 715 934 - -
Rops7g00726 965 Gene3D Phosphorylase Kinase; domain 1 630 955 - -
Rops7g00726 965 SMART serkin_6 631 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00726 965 CDD PAS 445 545 IPR000014 -
Rops7g00726 965 FunFam LOV domain-containing protein 419 583 - -
Rops7g00726 965 SMART pas_2 151 220 IPR000014 -
Rops7g00726 965 SMART pas_2 432 501 IPR000014 -
Rops7g00726 965 MobiDBLite consensus disorder prediction 119 140 - -
Rops7g00726 965 MobiDBLite consensus disorder prediction 346 375 - -
Rops7g00726 965 SUPERFAMILY Protein kinase-like (PK-like) 613 941 IPR011009 -
Rops7g00726 965 CDD STKc_phototropin_like 629 941 - -
Rops7g00726 965 MobiDBLite consensus disorder prediction 1 60 - -
Rops7g00726 965 Gene3D Transferase(Phosphotransferase) domain 1 715 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00726 Rops-Chr7 9687641 9701742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00726 1 957 AGC Kinase Gene Family AT3G45780 69.124 0.0 1322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g00726 Pkinase 8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00726 K20715 - gmx:100817565 1525.38