Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00724 ATGATTTGTTTTTTTTGCACAGGAAAATCACGCGAGAAAACTGACAGCAATCATAATAGCCATAGGGAGAAGCCCACTGCTGGTAAGGTCAAAGTTAATTTGAATGTGAATGGTAAAAGAGAAGATAATTCTAAGCATGATCAGCTTTCTCTGGATGTGAAGAATTTGAATTTAAAAGATGAGGGTGTGAATGGAAATGCTAACGGTTACCGGGCAAAGACATTTACTTTTGATGAGCTTGCGGCTGCAACAGGGAATTTTAGGTCAGATTGCTTTTTGGGTGAAGGAGGATTTGGCAAGGTTTATAAAGGGCACTTAGATAAAATAAATCAGGTTGTGGCAATAAAGCAACTCAACCCTCATGGACTTCAAGGTATCAGGGAATTTGTTGTTGAAGTGTTGACTCTTAGTTTGGCAGACCACCCAAATCTTGTTAAGTTAATTGGGTTTTGTGCTGAGGGAGAGCAAAGACTGTTGGTTTATGAGTACATGCCATTGGGATCCTTGGAGAACCATTTACATGATATTATGCCCGGAAGAAAACCACTTGATTGGAATACAAGAATGAAAATTGCCGCTGGTGCAGCTAGAGGTTTGGAGTATTTGCATGGCCAAATGAATCCTCCTATCATATACCGTGACCTTAAATGCTCCAACATTTTGTTAGGCGAGGGGTATCATCCCAAGTTATCTGATTTTGGTTTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGAGTTATGGGCACATATGGGTACTGTGCCCCTGATTATGCGATGACGGGTCAATTGACATTCAAGTCTGATATTTATAGCTTTGGGGTTGTTCTTTTGGAGATCATCACAGGAAGGAAGGCCATCGACCATACAAAACCTGCCAAAGAACAAAATCTAGTCGCATGGGCAAGGCCCTTATTCAGAGACCGGAAAAGATTCTCCCAAATGGTAGATCCATTGCTTGAAGGTCAATATCCAGTGAGAGGTTTGTACCAAGTTCTTGCTATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGACCTGTTATAACTGATGTGGTTACAGCTCTAAATTACCTTGCTTCCCAAAAATATGATCCCCAAATTCATTCAGTACGAAGCTCCAGAAGAGGTAAAGGCGATGGTCATAGACGTATTGTTAGTACTGATTCTTCTGAGTCAGACAGATCTGGAGAATAG 1212 0.4125 MICFFCTGKSREKTDSNHNSHREKPTAGKVKVNLNVNGKREDNSKHDQLSLDVKNLNLKDEGVNGNANGYRAKTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLDKINQVVAIKQLNPHGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLHDIMPGRKPLDWNTRMKIAAGAARGLEYLHGQMNPPIIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDHTKPAKEQNLVAWARPLFRDRKRFSQMVDPLLEGQYPVRGLYQVLAIAAMCVQEQPNMRPVITDVVTALNYLASQKYDPQIHSVRSSRRGKGDGHRRIVSTDSSESDRSGE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00724 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Rops7g00724 403 SUPERFAMILY Protein kinase-like (PK-like) 73 374 IPR011009 -
Rops7g00724 403 Gene3D Phosphorylase Kinase; domain 1 59 163 - -
Rops7g00724 403 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Rops7g00724 403 SMART serkin_6 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00724 403 FunFam Serine/threonine-protein kinase PBS1 164 379 - -
Rops7g00724 403 Pfam Protein tyrosine and serine/threonine kinase 92 360 IPR001245 GO:0004672|GO:0006468
Rops7g00724 403 MobiDBLite consensus disorder prediction 374 403 - -
Rops7g00724 403 CDD STKc_IRAK 93 362 - -
Rops7g00724 403 PANTHER OS07G0668900 PROTEIN 3 373 - -
Rops7g00724 403 Gene3D Transferase(Phosphotransferase) domain 1 164 381 - -
Rops7g00724 403 ProSiteProfiles Protein kinase domain profile. 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00724 403 FunFam probable serine/threonine-protein kinase RLCKVII 59 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00724 Rops-Chr7 9671012 9674475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00724 3 366 Glycoside Hydrolase AT3G07070 55.220 1.10e-146 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops7g00724 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00724 - - gmx:100794680 675.241