Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00712 ATGGAACAGTTCATTGATAACTTGCCGCCGATGGATCTGATTCGATCTGAGAAGATGACCTTCGTTCAGCTCATCATCCCCTTCGAGTCTGCTCATCGAGCCATCTTCTATTTAGGCGAACTCGGCCTCCTCCAATTTCGAGACTTAAATGCTGAAAAAAGCCCTTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGGCTTCTTCTCGTACTGTATTGCAACCGGACATTGACTTGGAGGATTTAGAGATACAACTTGCTGATCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTTTGGCAATCATATATTGAACTCCTGGAATTCAAGATTGTATTACAGAAGGCATGCGGTTTTCTTGTTTCAAGTCATGGCCATGCTGTTTCAGATGAGAGAGAACTACAAGAGAATGTATACTCAAATGATGACTATGTTGAAACAGCATCTTTGCTTGAACAGGAAATGAGGCCTCAACCATCAAATCCATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGATTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATCAAGGATCCTGTTTCAACTGAGATGATTGAGAAGACAGTGTTCGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGCGAGGCATTTGGTGCTAATTGTTATCCTGTTCCTGAAGATATAAGTAAGCAGAGGCAAATAACTAGGGAGGTTACAGCACGTCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATCAGGCACCGGAACAAGGCTCTAGCTTCTATTGCAGACCAGGTAGCAAAATGGATGAACCTGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATTTTTGCAAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATTTTCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACACTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCGAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATAATATTCCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAGTTCTTATAGCACGTGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTTTGATGGCACTGTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGCGTCAGCTTATCGATGCCGTGATAATTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCGAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTATGAAAATGAAGATGTCCATTCTGTTTGGGGTGGCACATATGAACTTAGGAATTATATTAAGTTATTTTAACGCTCGTTTCTTTGGAAACCCACTGGATATAAGGTACCAGTTTGTGCCACAGGTGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCTCGAGCGGACCTTTATCATGTGATGATATACATGTTTTTAAGCCCCACAGACAATCTTGGTGAGAATCAGCTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCATACCGAGAGATTTCAAGGTCGTAGTTATGGTATTTTGAATACTTCTGAGATGGATCTTGAGGTAGAGCCAGATTCTGCAAGGCAACATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACGCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCATCATATCTTCGGCTTTGGGCATTAAGTTTGGCTCACTCGGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTAACTGTTTTTGCCTTTGCAACTGCCTTTATACTACTTATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGGGATGGCTACAAGTTCCGGCCCTTGTCATTTGCCTCCTTAACAGAGGATGAAGATTGA 2460 0.4102 MEQFIDNLPPMDLIRSEKMTFVQLIIPFESAHRAIFYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMASSRTVLQPDIDLEDLEIQLADHEHELIEMNSNSDKLWQSYIELLEFKIVLQKACGFLVSSHGHAVSDERELQENVYSNDDYVETASLLEQEMRPQPSNPSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIKDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVTARLTDLEATLDAGIRHRNKALASIADQVAKWMNLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQMQEALQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAMMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYRCRDNSCRDAHTIGLVKYRDPYPFGVDPSWRGSRSELPFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGNPLDIRYQFVPQVIFLNSLFGYLSLLIVVKWCTGSRADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEMDLEVEPDSARQHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPLSFASLTEDED* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00712 819 Coils Coil 100 120 - -
Rops7g00712 819 PANTHER VACUOLAR PROTON ATPASES 13 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops7g00712 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220|GO:0046961
Rops7g00712 819 Pfam V-type ATPase 116kDa subunit family 38 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00712 Rops-Chr7 9445793 9456750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00712 1 812 Primary Pumps ATPases(2) AT2G28520 79.877 0.0 1356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00712 K02154 - gmx:100793301 1536.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00712 7 9445793 9456750 Rops7g00712 7 9445793 9456750 ECH
Rops7g00712 7 9445793 9456750 Rops3g00891 3 11394500 11405770 PCT