Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00705 ATGGAGGGAGATCAACAAGGCTCTTCTAATTACACGTTCCCACCTGGTTTCAGATTCCACCCATCTGATGAGGAACTCATAGTTCATTATTTGCAAAACAAAATCAACTCACTTCCACTTCCAGCATCCATTATAGCTGAAATAGATCTTTATAAGTATAATCCATGGGAATTACCCAAGAAGTCTTTGTTTGGGGAGGAAGAATGGTACTTCTTTAGCCCCAGAGACAGAAAGTACCCAAATGGATTAAGGCCAAACAGGGCAGCAGCTTCAGGATATTGGAAGGCAACTGGAACTGACAAGCCAATTCTTTCTTCTTCTGGATCAAAGCGCATAGGAGTGAAGAAAGCTTTGGTATTTTATTCTGGTAGACCTCCTAAGGGGGGTAAGACTGACTGGATCATGAATGAATATAGATTGGTAGACACAATCACCAAATCCTCCAGGCTAAAAGGTTCCATGCGGTTGGATGATTGGGTACTATGCCGGGTTCGATATAAAGGCTATTCACCCAAGAATTTATGTGACAATCAAGAGAATCCTTGTGAACCAAACATGCCAGCAAATCTACCAAGGAGTGAAGAATACCCAATAAACACGAACTTTCGGGCTAATATGATCACGGATTATGAATACAAAGACTATCAGATCGTAGCCTCTATTCTTGTTGGTGGACCTATACCTCCCACTGTGAACATGTCAAGTGTGAGCTTTAAGGGAATCAAAGGCAACAATCTAGCTTCAGTTTATGAAGATGGTTTCAATAAAGTGAATTCTCAAATGACAATTCCTTCTTTGGACAGTTACTTCAACTCACTGAAAAGAAAATCTAATGAGGATGATCAGTATGAAAATCTCATTTCTTTTAAGGGGAAGTTCAATACTGAGAACAGAATAGACGAATCTCCTAGCAAGGTGTTGACCAATAGAGAATTGAACTGCTATAACCAAAATCAGTCTCAGGATGACATTTTCAATGGAAACCCACCAGATCCTAGCATCAATTTTCAAGAGCTGAACGAAATAACCTTTACAGGAAGATACCCGCAGTGA 1053 0.4008 MEGDQQGSSNYTFPPGFRFHPSDEELIVHYLQNKINSLPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSSGSKRIGVKKALVFYSGRPPKGGKTDWIMNEYRLVDTITKSSRLKGSMRLDDWVLCRVRYKGYSPKNLCDNQENPCEPNMPANLPRSEEYPINTNFRANMITDYEYKDYQIVASILVGGPIPPTVNMSSVSFKGIKGNNLASVYEDGFNKVNSQMTIPSLDSYFNSLKRKSNEDDQYENLISFKGKFNTENRIDESPSKVLTNRELNCYNQNQSQDDIFNGNPPDPSINFQELNEITFTGRYPQ* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00705 350 Gene3D NAC domain 22 170 IPR036093 GO:0003677|GO:0006355
Rops7g00705 350 SUPERFAMILY NAC domain 11 167 IPR036093 GO:0003677|GO:0006355
Rops7g00705 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 274 - -
Rops7g00705 350 Pfam No apical meristem (NAM) protein 14 140 IPR003441 GO:0003677|GO:0006355
Rops7g00705 350 ProSiteProfiles NAC domain profile. 13 167 IPR003441 GO:0003677|GO:0006355
Rops7g00705 350 FunFam NAC domain-containing protein 72-like 22 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00705 Rops-Chr7 9341498 9343375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00705 8 179 NAC Transcription Factor Family AT1G69490 66.860 3.20e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops7g00705 NAM 6.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00705 - - gmx:100817193 615.535