Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00704 ATGTCCGTCATTGACATTCTCTTCCGTGTCGACTCCATATGCCAGAAATATGACAAATACGACATTGATAAACAGCGCCAGCTCAATGCCTATGGCGATGATGCCTTTGCTCGCGTCTATGCTGCATTTGAATCCTCCATTCAAACCGCTATCGATAAATCCGAGGCTGCTTCCACGGAGAAGAACAGGGCAGTTGCTGCGGCTTTGAATGCAGAGGTTCGTCGAACCAAGGGTAGATTAATGGATGAAGTTACTAAACTTCGCAAACTGGTGAATAAGAAGGTTAAAGGTCTCACAAATGAAGACATGGCCATTCGCCGAGATCTTGTTATGGCATTGCCAGATAGAATCCAAGAAATACCAGATGGTATTACCGGAGCTGCTAGTCATACTGCAGAATGGGCTGCTACCTCATCTAATCCACATATCAAGTTTGATTCATCAGATGGAAATCTTGACAGTGAATATTTCAATCAAAGTGAAGAGTCCAGTCAATTTCGACAAGAGTATGAAATGCGCAGGATGAAACAGGATGAAGGGCTTGATGTCATATCAGAGGGATTGGATACCTTGAAGGATCTGGCCCATGATATGAATGAGGAATTAGATCGGCAAGTTCCTTTAATGGATGAGATTGACACAAAGGTGGATAAGGCAACATCTGACGTGAGAAACACTAACGTAAGGCTGAGGAAAACTGTCACTGAGCTGAGGTCTAGTCGAAATTTTTGCATTGACATCATTCTGCTGTGTGTTCTTCTGGGAATCGTTACCTATTTATACAATGCACTGAGATGA 798 0.4311 MSVIDILFRVDSICQKYDKYDIDKQRQLNAYGDDAFARVYAAFESSIQTAIDKSEAASTEKNRAVAAALNAEVRRTKGRLMDEVTKLRKLVNKKVKGLTNEDMAIRRDLVMALPDRIQEIPDGITGAASHTAEWAATSSNPHIKFDSSDGNLDSEYFNQSEESSQFRQEYEMRRMKQDEGLDVISEGLDTLKDLAHDMNEELDRQVPLMDEIDTKVDKATSDVRNTNVRLRKTVTELRSSRNFCIDIILLCVLLGIVTYLYNALR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00704 265 SUPERFAMILY SNARE fusion complex 164 232 - -
Rops7g00704 265 PANTHER SYNTAXIN 45 252 IPR045242 -
Rops7g00704 265 CDD SNARE_Qc 176 232 - -
Rops7g00704 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Rops7g00704 265 Gene3D - 171 232 - -
Rops7g00704 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Rops7g00704 265 Pfam SNARE domain 208 257 IPR000727 -
Rops7g00704 265 FunFam Putative syntaxin-71-like 171 232 - -
Rops7g00704 265 SMART tSNARE_6 166 233 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00704 Rops-Chr7 9337984 9341203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00704 1 265 SNARE and Associated Proteins AT3G09740 67.041 1.28e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00704 K08506 - gmx:100777251 446.047