Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00695 ATGGAGAGTGGCACAAACTCCCCTACTTCCTCTCCCTCATTTTCTCACTCTCCCACTTCTCCATCTTCTTCTTCCCCTCCACAACCCCAAGTTGTGATGAGCCCATGTGCTGCTTGCAAGATCTTGAGAAGAAGATGTGCAGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTGAACCTGTCAAGTTCACCACTGCCCACCGAGTCTTTGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCGGAGTCTCAAAGAGCTGATGCAGTGACCAGCATGGTTTACGAGGCTGGAGCAAGAATAAGAGACCCAGTATACGGATGTGCAGGTGCAATTCACCAGCTCCAAAAGCAAGTCAATGAGCTTCAAGAACAATTAGCAAAGACACAAGCTGAGATAGTAAAAATGCAATTCCAACAAGCCAATCTCGTGGCTCTACTTTGCATGGAAATGGCAGAAACTCCCCAAGAATCAGCTCAACAATCAGTGGAGAACTTCATTTCAAGTCCTCCCCACAGCAGTGGCTATCAAAACAATCTGAACTTCTTTGAGGAGAACACCAACCTTAACTCTATGTGGGAGCCTCTTTGGACATGA 603 0.4677 MESGTNSPTSSPSFSHSPTSPSSSSPPQPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPVKFTTAHRVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPVYGCAGAIHQLQKQVNELQEQLAKTQAEIVKMQFQQANLVALLCMEMAETPQESAQQSVENFISSPPHSSGYQNNLNFFEENTNLNSMWEPLWT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00695 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 164 - -
Rops7g00695 200 MobiDBLite consensus disorder prediction 1 31 - -
Rops7g00695 200 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Rops7g00695 200 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Rops7g00695 200 Coils Coil 114 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00695 Rops-Chr7 9189746 9191594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00695 31 200 AS2 family AT2G28500 65.946 1.79e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops7g00695 LOB 8.7e-41 No_clan