Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00690 ATGATTGGCTGCTGTAGTTGCTTTGGGTTCAGCAAGAAACAAAAACGTCGACGGGCTAGGCGTGGTGGCATCAACAATTTTCTCTCCCATGGGCTATTGATGGATGGAGAAACAGATGGTGAGGTCTCATGTAGTGGTGACGTTACTAGTAACACCACCAGTGGAGATGATAGTGAGGTGCAAAATCTACCCAATCGTTCAGAGGAAATTTTGAAATTTAGAGCTGAGAATGGCATGATTTGTAGGCCCTTTCCTGTTAAGGAGACTAACAAACTTATTCGATCAGAGGATGAAAATGGGAACAAGATGATAAATGAGTATATTCGAGAGTATAAGATTGGTTCTGGTAGCTATGGCAAAGTGGCTCTTTATCAAAGTTCTATTGATGGAAAGCATTATGCAATTAAGGCCTTTCATAAGTCTCATTTACGGAAGCTTCGAGTTGCACCATCTGAGACTGCCATGACTGATGTTCTACGTGAGGTATTGATTATGAAAATGCTGGAGCATCCTAATATAGTCAATCTCATCGAGGTGATTGACGACCCAGAGTCGGATGACTTCTACATGGTACTTGAATATGTGGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCGTCATTGTGCCTTAGGTGAAGAGACTGCTAGGAAATACTTGCGTGATATAGTCTCGGGATTAACTTATCTTCATGCTCATAATATAGTTCATGGAGATATAAAACCTGATAATCTTTTGATTACTCGTCATGGCACAGTGAAGATAGGGGATTTCAGTGTCAGCCAAGCTTTTGAGGGTGGCAATGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAGTGTTGTTTAGGCCTTACATATCATGGCAATGCTTCAGACACGTGGGCAGTAGGAGTTACTTTGTACTGTATGATCTTGGGTGAATACCCATTTCTCGGAGACACACTTCAAGATACATATGACAGAATAGTCAATAATCCTTTAGAACTCCCAGATGACATTAACCCGCAGTTGAAGAACTTAATAGAAGGATTACTTTGCAAAGACCCAAGACTAAGGATGACATTGGGCGAAGTTGCGGAGCATAACTGGGTTATTGGAAATGATGGGCCAATTCCTGAGTATTTGTGTTGGTGCAGACGCAAGAACCTGGAGAGGGAAGACTTTGACGACAGCAATATGCTTGCTTGA 1200 0.4242 MIGCCSCFGFSKKQKRRRARRGGINNFLSHGLLMDGETDGEVSCSGDVTSNTTSGDDSEVQNLPNRSEEILKFRAENGMICRPFPVKETNKLIRSEDENGNKMINEYIREYKIGSGSYGKVALYQSSIDGKHYAIKAFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRHCALGEETARKYLRDIVSGLTYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEGGNDELRRSPGTPVFTAPECCLGLTYHGNASDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPLELPDDINPQLKNLIEGLLCKDPRLRMTLGEVAEHNWVIGNDGPIPEYLCWCRRKNLEREDFDDSNMLA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00690 399 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 62 370 - -
Rops7g00690 399 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Rops7g00690 399 SUPERFAMILY Protein kinase-like (PK-like) 103 381 IPR011009 -
Rops7g00690 399 Gene3D Phosphorylase Kinase; domain 1 101 204 - -
Rops7g00690 399 SMART serkin_6 107 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00690 399 FunFam Serine/threonine-protein kinase Ssp1 101 203 - -
Rops7g00690 399 CDD STKc_LKB1_CaMKK 113 368 - -
Rops7g00690 399 Gene3D Transferase(Phosphotransferase) domain 1 205 375 - -
Rops7g00690 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Rops7g00690 399 ProSiteProfiles Protein kinase domain profile. 107 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00690 399 FunFam Serine/threonine-protein kinase GRIK2 97 398 - -
Rops7g00690 399 Pfam Protein kinase domain 109 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00690 Rops-Chr7 9108319 9114656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00690 113 375 CBL-interacting serine-threonine protein kinases AT5G35410 33.080 8.69e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Rops7g00690 Pkinase 6.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00690 K00908 - gmx:100776013 702.975