Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00685 ATGCGATTGCTATGGGGGCTAAGGCTGCCCCTGCTCATACTGATTCAACTTTTATACCCTAACAACGCTGAGGCTGTGTTCACTTTTAAGGGTTCATTTGGCGGTCCACAGCAATTTGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACGAAAAGATTCAGGTGGAATAACAGCAAAGATAGATGGGAATAATGACATTCCAACACTTAAGCCTCTTCAAGAAGCTCAAGTTGACAAACCAGGAGGAAGAAGGGATGTTGCAGTAGTTGGTGGGGTTGTTGCTGCCTTTGTTGTCATTGTCATTGTGGTGATTGTCTATATCTGCTTTATTCGTGTTAAAAGATTTATAAGGCAAACATCTGAGACAGCTTCTTCTACACCATCTCAGACTGTTGAGATTGGAAGAGTCAACAGTTCACAGTATGTTGATGCTTTCTTTCCACATTATACGCAGGACACAAGGCAGTTAACAATTTTGGAGCTAGAACAAGCTACACGAAATTTCAGTCAAAGTAATATTATAGGTGAAGGTGGATTTGGTTTTGTATACAAGGGTTTGCTTCAAGATGGATCCATTGTGGCTATAAAAAGGCGCCTATTTACTCTAACAAGGGATTTCATCCTTGAGGTGAAGCAGATAGCTCACATTCACCACATTCATCTTGTCAAGCTTATAGGCTATTATGAAGATAGCTATCAACAATTACTTGTGTGTGAATATTTCCCTAATGGCAATGTAGGGACTCACCTATATGGCAGTGAAGGCTTACCTATTGGAAGGTTAGACTTGAGGCGAAGGTTATCCATTGCTTTAGGCGCGTCCAAAGGACTTGAACATCTTCACAGTTTGGTCCCTCCTTTGGTTCACAAAAATTTTAGAACTAGCAATGTTCTGTTAGAAGAAAATTATACTGCCAAGGTTTCTGATTATGGATTCTGCAAATTGCAAACAAAAGTTGATCAGGCTGGCTCATCTTCAAATGTAGACTTCTTTCTTGATCCAGAGTTGAGCTTATCACAAAACTATTCAGAGAAGAGTGATGTATACAGTTTTGGGGTGTTCTTACTAGAGTTGATTAGTGGCTGTGAAGCACACAACAGAAACATGTCAAACCCAGATGAAACTCTAGTATTTCAGGCTAAAAATAGCATTGGCTTGGACAAGTTTGTTGACTTAACACTAAGAGACCAAGAAAAGCATGCTGCAAGACGAATATTGAAGTTGGCATTGCTATGTGTGGACGTGGCTTTTAGAAGACCATCAATGGCGCAAATTGTGCAAGAGCTGGAGCAGATTCAGAGAGATATTGTTCCTTTGTATTCTCAAGTCAATGATGAGATTGGTGTGGTGACACTTGGGAGTGAGCTCTTCCAATAA 1407 0.403 MRLLWGLRLPLLILIQLLYPNNAEAVFTFKGSFGGPQQFGCSIVKYPCQMQWPCLDCYKRKDSGGITAKIDGNNDIPTLKPLQEAQVDKPGGRRDVAVVGGVVAAFVVIVIVVIVYICFIRVKRFIRQTSETASSTPSQTVEIGRVNSSQYVDAFFPHYTQDTRQLTILELEQATRNFSQSNIIGEGGFGFVYKGLLQDGSIVAIKRRLFTLTRDFILEVKQIAHIHHIHLVKLIGYYEDSYQQLLVCEYFPNGNVGTHLYGSEGLPIGRLDLRRRLSIALGASKGLEHLHSLVPPLVHKNFRTSNVLLEENYTAKVSDYGFCKLQTKVDQAGSSSNVDFFLDPELSLSQNYSEKSDVYSFGVFLLELISGCEAHNRNMSNPDETLVFQAKNSIGLDKFVDLTLRDQEKHAARRILKLALLCVDVAFRRPSMAQIVQELEQIQRDIVPLYSQVNDEIGVVTLGSELFQ* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00685 468 Gene3D Transferase(Phosphotransferase) domain 1 251 457 - -
Rops7g00685 468 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
Rops7g00685 468 Pfam Protein tyrosine and serine/threonine kinase 181 439 IPR001245 GO:0004672|GO:0006468
Rops7g00685 468 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 105 442 IPR047117 -
Rops7g00685 468 SUPERFAMILY Protein kinase-like (PK-like) 159 449 IPR011009 -
Rops7g00685 468 Gene3D Phosphorylase Kinase; domain 1 140 250 - -
Rops7g00685 468 ProSiteProfiles Protein kinase domain profile. 178 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00685 468 FunFam receptor-like serine/threonine-protein kinase NCRK 152 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00685 Rops-Chr7 9043260 9046987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00685 87 444 Receptor kinase-like Gene Family AT4G02010 34.828 1.88e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Rops7g00685 PK_Tyr_Ser-Thr 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00685 - - gmx:100780443 723.391