Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00666 ATGGGTTTTGTTAGGTTTGAAGATGATCCTGAAGTAGCAAAAACCCCTACAAATAACAGTGACAATGAGATTAAGCTTAAATACAACATTGATGGAACAGAAATACCTGAGCCTAGTTCCAAAACGGCTCAAAAGGTGACAAGGAAGACAAAAAAGTTCATGAAAACTAGAGTATTGTCAAGAGTATTCTCAGAGGACTATGACAGAGTTAAAAGAAGAGTATTTGATCCTAGGGGACAAACCATCCGTCGCTGGAACAAGATTTTCTTGGTTGCATGTTTAGTATCTTTGTTTGTGGACCCTTTGTTCTTTTATTTGCCAGTAGCTAGACATGAAGTTTGCATTGATATTGGAATAACTCATGAAGTTATCCTCACATTTATTAGAACAATTGGGGATGTCTTCTACATAATTCAAATTTTCATGAAGTTTCATACAGCTTATGTTGCTCCTTCTTCCCAAGTATTTGGGAGAGGAGAGCTTGTACTAGTTTATTCTAAGATTGCAGCTAGGTACCTAAGCAAGGGTTTCTTGTTAGACTTTATTGCTGCCCTGCCCCTTCCTCAGGTGTTAATTTGGATTGTTATCCCAACTCTTAGGGGTTCCACTATGGCAAATACCAAAAATGTCCTTCGTTTCTTCATCATTTTTCAATACCTTCCAAGGCTATTTTTGATATTTCCACTTTCATCACAAATTGTAAAGACCACAGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACTTGATGCTTTACTTGTTGGCCAGCCATATTGTAGGAGCTTGCTGGTACCTTCTATCAATTGAACGTCAAGAAGCATGTTGGAGAAGTGTGTGTGATATGGAAAAGTCAACATGTCAATATGGATATTTTGACTGCCACAGGGTCAAAGATGCCCTCAGGGTATCCTGGTTTATAGCTAGTAACATCACAAATTTATGTTCACCAAATGTGGACTTTTATCAGTTTGGTATATATGCTGATGCAGTGACCAACAAAGTTACATCCTCGGCATTCTTTAATAAGTACTTCTTTTGTCTGTGGCGAGGCCTAAGGAATCTGAGTTCTTTGGGACAAGACCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTTGTTGCAACCCTTGGATTGGTTCTTTTTGCGTTGCTGATTGGTAATATGCAGACATACCTTCAATCAATAACTGTTCGCCTAGAAGAATGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGACAACTACCTCCGGAACTAAGAGAGTCTGTACGTAAATATGATCAATATAAATGGTTGGCTACACGAGGAGTAGATGAAGAAGCTATCCTCAGAGGACTTCCATTGGATCTTAGGAGAGACATCAAACGCCACCTTTGTCTTGAACTAGTTCGAGGAGTTCCATTGTTTGATCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGACTAAAGCCTGCATTGTGCACTGAGGGAACCTATCTTGTTCGTGAGGGTGATCCTGTGAATGAGATGCTCTTCATAATTCGAGGGCATCTTGATTCTTACACAACCAATGGAGGCCGTGCTGGATTCTTCAACTCTTGCCGTATTGGCCCAGGTGATTTTTGTGGTGAAGAACTATTAACATGGGCATTGGATCCACGACCAAGTGTGATACTCCCTTCTTCCACTCGAACAGTTAAAGCCATATCAGAAGTAGAAGCCTTTGCACTCATAGCTGAAGACCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGACATAAATTCAAATTTTATTCACACCAATGGAGAACATGGGCTGCTTGTATCATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTGAGGGCCAAGGAGAATGTTGCAGCTGCTGAACATGAAACACCAGCATCTGGTTCAGGCTTTGTTGTTTATGGAACAAGGGTGGCTAGAAGCACTAGGAAAGGTGTCAATATCGATATGCATTCTGGGACAGATGTTAGCTCTTTGAAGAAACCTGCAGAACCAGACTTTTCAGCTGATGAATAA 2091 0.4036 MGFVRFEDDPEVAKTPTNNSDNEIKLKYNIDGTEIPEPSSKTAQKVTRKTKKFMKTRVLSRVFSEDYDRVKRRVFDPRGQTIRRWNKIFLVACLVSLFVDPLFFYLPVARHEVCIDIGITHEVILTFIRTIGDVFYIIQIFMKFHTAYVAPSSQVFGRGELVLVYSKIAARYLSKGFLLDFIAALPLPQVLIWIVIPTLRGSTMANTKNVLRFFIIFQYLPRLFLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYLLASHIVGACWYLLSIERQEACWRSVCDMEKSTCQYGYFDCHRVKDALRVSWFIASNITNLCSPNVDFYQFGIYADAVTNKVTSSAFFNKYFFCLWRGLRNLSSLGQDLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESVRKYDQYKWLATRGVDEEAILRGLPLDLRRDIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACIIQAAWRRHKKRKEAAELRAKENVAAAEHETPASGSGFVVYGTRVARSTRKGVNIDMHSGTDVSSLKKPAEPDFSADE* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00666 696 Coils Coil 628 648 - -
Rops7g00666 696 SUPERFAMILY Voltage-gated potassium channels 76 399 - -
Rops7g00666 696 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g00666 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 692 - -
Rops7g00666 696 FunFam Cyclic nucleotide-gated ion channel 1 404 468 - -
Rops7g00666 696 ProSiteProfiles cAMP/cGMP binding motif profile. 477 574 IPR000595 -
Rops7g00666 696 MobiDBLite consensus disorder prediction 670 696 - -
Rops7g00666 696 Gene3D Helix hairpin bin 405 468 - -
Rops7g00666 696 Pfam Ion transport protein 85 404 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops7g00666 696 Gene3D - 102 403 - -
Rops7g00666 696 SUPERFAMILY cAMP-binding domain-like 407 602 IPR018490 -
Rops7g00666 696 CDD CAP_ED 477 608 IPR000595 -
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 440 447 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 390 399 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 346 363 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 140 149 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 257 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 PRINTS EAG/ELK/ERG potassium channel family signature 372 383 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops7g00666 696 SMART cnmp_10 477 608 IPR000595 -
Rops7g00666 696 Gene3D Jelly Rolls 475 595 IPR014710 -
Rops7g00666 696 FunFam Cyclic nucleotide-gated ion channel 1 475 593 - -
Rops7g00666 696 ProSiteProfiles IQ motif profile. 613 641 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00666 Rops-Chr7 8807851 8811607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00666 52 695 Ion Channels AT2G28260 74.224 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00666 K05391 - gmx:100811847 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00666 7 8807851 8811607 Rops7g00666 7 8807851 8811607 ECH
Rops7g00666 7 8807851 8811607 Rops3g00966 3 12369016 12373763 PCT