Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00665 ATGAAGCCTCAACTCAAAGTTTCTGTTGCTTTTGTTATGAGCTTGCTCTGGTTTCAGCACTCATTTTGTGATGAACCTTCTGATACTGGCCTAAACAAGTGGAAATGTCAATGTTCTTCTCTCCAAGGGAACCAGAGAAACTCTCTTGCTAATTGCTCCAATTCATGTGATTGCCATTCAGATGCTGAAGAGAGTGCATCCATATGGACATGCATGTGTGATCTGAGTGGGTTTCCTAAAGTGGCAGCAGATGGCAATAATTCTAATTGCTTTAATGCCTGCAACTGCACCTGGGGAACTGTTAGCATACCACTGGGTTCAAAGAAACACATTTCTAGCAAGATTGTATTAGTTATTCTCATAATATATGTTATATGCACAACTATCGCATTTCTTGCCACGGTTGTATGTTATGTCTGCCGAAGGGAGAGATGTCCTATTCAATCACCGATGTTCTTATCAGATAAGGAAACGAGTTACAGTAGTACCACCAACTTTATTAGTCACAGAACTTTTTCAGTTCCAGAAACAAAAGTCTCTATAAATTCTTCTATTAGTCATATTACAGGATGCTTTCAAAAGACCTCTTTCTTGTTTGGGAGCCAAAGAGAAACTTTTCATGGAAATATTATTCAATTTTCGTTTGCTGAACTGGAAAATGCCACTGAAAACTTTTCAGCATCCAACCTAATTGGACTAGGTGGAAGCAGTTATGTATACCGTGGTCGACTAAAAGATGGTAGTAATGTGGCAGTCAAGCGACTAAAACATCAAGGAGGGACTGAAGCAGACTCTGAATTTTTTACAGAGATTGAACTGTTGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAAATGTTCAGAGGTTACTAGTGTTTGACTACATGACTAATGGAAATTTGAGGGACCGTTTGGATGGAATTTTTGGGAAGAAAATGGATTGGGCTACTCGTGTTACAATTGCATTGGGAGCTGCAAGGGGCTTGGAGTATCTTCATGATGCAGCTGCACCAAGAATTTTGCACAGAGATGTCAAATCCACAAACATTCTTCTGGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACCTGAGAGCTGATGACCTTCCCAGTTGTTCAGATTCTCCAGAAAGAATGAAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAGTCTGATGTTTTCAGTTTTGGGGTGGTTCTACTTGAGCTTATCAGTGGTCGGCAACCTATCCATAAATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTACTCCTCGGTTACAGGATAGTAGGCGAGTAATAATGGAGTTGGCTGATCCAAGATTGAAAGGAAACTTCCCAGAAGACGAGGTGCAGATAATGGCATATTTAGCACAGGAGTGCTTGTTGTTGGATCCTGACACTCGACCAACTATGAGTGAAGTTGTTCAAATTCTTTCAAGTATTTCCCCTGGCAAATCTAGAAGGAAAAGAAACATTCCAGTGGGCCTTTTTCAGGAACCAAAGGACATAGAGAGGCAAAAACAAACTCCATCGAGTAGATTTTCAGCTCGAAATATATTGGCACTAGACCATAATCTTCGTGTTGGAAACGAAATTAAAGATATAGATACAGTTTCAACTGAGTATATGAAGAGTTTGATTCTCTGGACTTCTAAAGGTGAGAACTGGCATGCATCAGAAGAGGAAATGGTAGATATAACTGAGCCTCGGTTTGAATCATTTTGCATCACAAATGTCAATTTCCCTTGA 1827 0.4001 MKPQLKVSVAFVMSLLWFQHSFCDEPSDTGLNKWKCQCSSLQGNQRNSLANCSNSCDCHSDAEESASIWTCMCDLSGFPKVAADGNNSNCFNACNCTWGTVSIPLGSKKHISSKIVLVILIIYVICTTIAFLATVVCYVCRRERCPIQSPMFLSDKETSYSSTTNFISHRTFSVPETKVSINSSISHITGCFQKTSFLFGSQRETFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGRLKDGSNVAVKRLKHQGGTEADSEFFTEIELLSRLHHCHLVPLIGYCSELKGKNVQRLLVFDYMTNGNLRDRLDGIFGKKMDWATRVTIALGAARGLEYLHDAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKNLRADDLPSCSDSPERMKGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEESLVVWATPRLQDSRRVIMELADPRLKGNFPEDEVQIMAYLAQECLLLDPDTRPTMSEVVQILSSISPGKSRRKRNIPVGLFQEPKDIERQKQTPSSRFSARNILALDHNLRVGNEIKDIDTVSTEYMKSLILWTSKGENWHASEEEMVDITEPRFESFCITNVNFP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00665 608 SUPERFAMILY Protein kinase-like (PK-like) 205 504 IPR011009 -
Rops7g00665 608 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Rops7g00665 608 PANTHER OS01G0750732 PROTEIN 68 523 - -
Rops7g00665 608 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00665 608 FunFam receptor-like serine/threonine-protein kinase NCRK 199 305 - -
Rops7g00665 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Rops7g00665 608 Pfam Protein kinase domain 227 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00665 608 SMART serkin_6 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00665 608 FunFam receptor-like serine/threonine-protein kinase NCRK 306 516 - -
Rops7g00665 608 CDD STKc_IRAK 231 507 - -
Rops7g00665 608 Gene3D Transferase(Phosphotransferase) domain 1 306 520 - -
Rops7g00665 608 Gene3D Phosphorylase Kinase; domain 1 199 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00665 Rops-Chr7 8794197 8799681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00665 1 605 Receptor kinase-like Gene Family AT2G28250 51.227 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Rops7g00665 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00665 - - gmx:100499641 1015.76