Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00663 ATGATGTTACGGTATTATAACGGAGAGAAGGGCAATGGCGAGGTGTCGGCGGCGGACCCGTTAAAGTGGGAGGCAGCGGCGGATTCATTAAAGGGTAGCCATTTGGAGGAAGTGAAGAAGATGGTGAAGGATTACCGGAAAGAGGTGGTGAGGGTGGGAGGGGAGACGTTGACGGTGGGGGAGGTGGTGGCGGTGGCGGAGAGGAGGGTGGTGGTGGAGCTGAATGAGGCGGCGCGGGTGGGAGTGAAGGCTAGTAGTGAATGGGTGATGGATAGTGTGCACAAAGGCATTGATTGTTATGGGGTCACTACCGGCTTTGGTGCAACCTCACATAGAAGAACCACACAGGGTGTTGCCCTCCAAACCGAGCTCATTAGGTTTTTGAATGCTGGAATTTTTGGGAATGGGACAGAAGCATGCCATACTTTGCCACAGAGTGCAACAAGAGCTGCAATGCTGGTAAGAATCAACACCCTCCTTCAAGGCTACTCTGGCATCAGATATGAGATACTAGAAGCCATTGCAAAACTGCTCAATCACAGCATTACACCAAGCTTGCCATTACGTGGTTCAATTTCTGCCTCGGGGGACTTGGTTCCATTTTCATACATTGCTGGACTTCTGACAGGGAGGTCTAATTCAAAGGCTATTGGCCCCAATGGTGAATTCCTAAGTGCTGCAGAAGCTTTCCATCTGGCTGGTATTGGTGGGGGCTGCTTTAAATTGCAACCCAAGGAGGGTCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCATCTATAGTTCTATTTGAGGCTAACATCTTAACCATTTTATCTGAAGTCATGTCTGCTATTTTTGCTGAAGTAATGCAAGGGAAGCCAGAGTTTACAGACCATTTGACTCACAAATTGAAACATCACCCTGGCCAGATTGAGGCTGCAGCAATAATGGAACATATCTTGCATGGAAGTGCTTATGTTAAAGCAGCACAAAAGTTACATGAGATAAACCCTTTTAAAAAGCCTAAGCAAGATAGATATGCTCTTAGGACTTCACCACAATGGTTAGGTCCTCAAATTGAAGTCATTCGGTTATCAACAAAATCCATTGAACGAGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTATCAAGGAACAAAGCTTTACATGGTGGAAATTTTCAGGGTACCCCAGTAGGGGTTTCTATGGACAACACAAGATTAGCTTTGGCTGCCATTGGAAAACTCAGTTTTGCTCAAATGTCTGAGTTGGTTAATGATTTCTACAATAATGGGTTGCCTTCAAATCTCTCAGGGGGTCACTGTCCAAGCTTGGATTATGGATTTAAGGGTGGTGAGATAGCAATGGCTGCATACTGTTCTGAGCTTCAGTATCTAGCTAACCCTGTCACTAATCATGTGCAAAGTGCGGAACAACACAATCAAGATGTGAATTCATTGGGACTAATCTCTGCCAGGAAAACAGCTGAAGCTGTTGAAATATTAAAACTCATGTCTTCAACCTACCTCATTGCTCTTTGTCAAGCAATAGATTTGAGGCATTTGGAGGAGAACCTTAAGAACACAGTTAAGAATACAGTGAGCCAAGTGGCTAGAAAAGTCCTGAATGTGGGCATCAATGGAGAGTATCATCCTTCCAGGTGTTGTGAGAAAGATTTGCTCAAAGTGGTTGATTGTGAGTATGTTTTTGCTTACATTGATGACCCTTGCAATGCTACATACCCACTAATGCAAAAACTAAGGCAAGTACTTGTGGAACATGCATTGCGGAGTAATAATGGTTTGAAAAGTATTAATGCTTCCATCTTCCTTAAGATTGGTGCCTTTGAGGACGAACTTAAGAGAGTTTTGCCCAAAGATGTTGAATATACAAGGAATTCCTTTGAAAAAGGGAGTTCAGCAAGTCCTAACAAAATCAAGGAATGCAGGTCTTTTCCACTGTATAAGTTTGTCAGAGAGGAATTGCAGACTGAGTTTTTAACGGGAGAGAGAGTTAAATCCCCTGGAGAAGATTTTGATAAAGTTTTTAATGCAATTACTCAAGGAAAGATAATAGACCCATTGTTCGAATGCCTCAAGGATTGGGATGGTACTCCTCTTCCTATATGTTGGAGCTCCTCATAG 2139 0.4371 MMLRYYNGEKGNGEVSAADPLKWEAAADSLKGSHLEEVKKMVKDYRKEVVRVGGETLTVGEVVAVAERRVVVELNEAARVGVKASSEWVMDSVHKGIDCYGVTTGFGATSHRRTTQGVALQTELIRFLNAGIFGNGTEACHTLPQSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNHSITPSLPLRGSISASGDLVPFSYIAGLLTGRSNSKAIGPNGEFLSAAEAFHLAGIGGGCFKLQPKEGLALVNGTGVGAGLASIVLFEANILTILSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILHGSAYVKAAQKLHEINPFKKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLSFAQMSELVNDFYNNGLPSNLSGGHCPSLDYGFKGGEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMSSTYLIALCQAIDLRHLEENLKNTVKNTVSQVARKVLNVGINGEYHPSRCCEKDLLKVVDCEYVFAYIDDPCNATYPLMQKLRQVLVEHALRSNNGLKSINASIFLKIGAFEDELKRVLPKDVEYTRNSFEKGSSASPNKIKECRSFPLYKFVREELQTEFLTGERVKSPGEDFDKVFNAITQGKIIDPLFECLKDWDGTPLPICWSSS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00663 712 Pfam Aromatic amino acid lyase 57 530 IPR001106 -
Rops7g00663 712 FunFam Phenylalanine ammonia-lyase 521 642 - -
Rops7g00663 712 Gene3D - 521 642 IPR023144 -
Rops7g00663 712 CDD PAL-HAL 74 518 IPR001106 -
Rops7g00663 712 FunFam Phenylalanine ammonia-lyase 10 254 - -
Rops7g00663 712 NCBIfam phenylalanine ammonia-lyase 19 698 IPR005922 GO:0005737|GO:0006559|GO:0016841
Rops7g00663 712 FunFam Phenylalanine ammonia-lyase 255 572 - -
Rops7g00663 712 Gene3D Fumarase/aspartase (Central domain) 256 702 - -
Rops7g00663 712 Gene3D - 10 254 IPR024083 -
Rops7g00663 712 SUPERFAMILY L-aspartase-like 19 708 IPR008948 GO:0003824
Rops7g00663 712 PANTHER HISTIDINE AMMONIA-LYASE 17 708 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00663 Rops-Chr7 8768672 8771574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00663 8 708 Monolignol Biosynthesis Gene Families AT3G53260 75.354 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00663 K10775 - vvi:100241575 1115.52