Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00655 ATGAGTAGGTTAAGGCCTGAGTCTCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAATCCAAAACGGTTCCCAACATTTACAGGAACTCCCTAACAATCTGGAACAGTTATCATCACAGCCAGGGTTTAACATGGATCTTCTTCAAGTTAGAAATGTTAGAAATGCCAACATGCTTGATGAACCAGCTGTTTATGCATCAGAAATGCCCAACTTTTCAACCGCTTCCAATCCTTTATCTGCTCCAAGGAACGCAATGGAGTATCAGGAATTAGGTGCATCTGAATCAAGTAGGCTAATGATGCACCAGTATGGTTCATTTCCCCATTCCTTGGCAGGTCTTCATGCTTCCCAAAAAGAACAGAGTGAACTGCGTAATTTGGAAAATTGGAGAAACAGTAACCGCCATGATTGGGTTGTAAATTATGCAAATAGTTCTCTGGCTAACGGAAGCAACACTACCAGTACCAACTCTTTTGTTGATGCTTACCAGCACTATGGGAAGCCTAGTTACAATGAACAGTTTGGCAATGCATCTGGTGAGATGGCTAGTAGAGAAACTCAGAAGCAACTAGGTGTGATACAGCTACCTCCTCCTTCATCCCCAGTGTATCATCAGAATGGTTTGCAGGATATTGTCAAATCAGCTTCTATCAGTGCCCATGGATCAAACATGGCTTCACTGATGCAGCAAACTGGCCAAGGCATTTGGGTAGGGGATGCCAGTGAACTTGAGCTTCAACCATGCTATGGAAATAGTCAGTCAAATCAGTTACGTTTTGGATGGACAAATCGACCAGTTGACAATACCCTTCGTTGGAGTAGCTCGCTGGGTTTCACGGACAAAAAGGTTGATGAACACAACCCTGGGCCTCTTCTGAATGATTCAAATCCTCAGAGCTTATCCTTATCACTCTCATCGAATGCACAATCCAAGGCTTGTGTTTCTCAATTTGAAGAGGGATCTGCTTCAGTTGACCTTCAATCTGGATGTGGCACTTCTAAGGATCCTCAAAGTGTCAAGTATATGAAATCTATCATCGTTTCTAGAGATTGTGGGAAATCACTTCAAGACACGGTGGGAATACCTTCGAAGACTAGTTATCAAAATGTGGGTCCCCTTGGCCCCTTCACTGGGTATGCTACTATTCTTAAGAGTTCAAGATTCTTAAAGACTGCCCAACAGTTGTTAGATGAGTTTTGCTCTATATCTGGTCCAAAATTTGCAAAATCAAGTGATGTTTCAGAGAGGGTCGTCTCTCGAGAAGTTAGTGCTTCTACTTCTGCTGATACTGTCACTGTCAATGAAACTGGGGTTGCTTCAAAAGGTAATAATAATAATTCAGGTTCTTCCTCATCTAAGTTCTACATTTCAAACGAAAATAGTGTTGATTGGGAGGCCAGAAGTAGCTTTGGTCTTTCTTCACGGCCGGATTATCAACAGAAGAAAGCAAAGCTCCTTTACATGCAAGAGGAGGTCAGCAGGCGATATAAACAGTACCATCAACAAATGCAAATGGTTGTTTCATCCTTTGAATCTGTAGTGGGTCTTAGTTCAGCTATTCCTTACATCTCCTTGGCTCTCAAGTCAGTATCAAAACACTTCAGGTGCCTAAACAATTCTATCTCAGATCAGCTGAAGCTTATAAGCGAAGTTTTGGGAGAAGATTTAACAGTTCCCACCACCAGTACAAGTGGTAAAGTTGACACTAATATGACAAGGCTAAGGTGCATGGACCAAAGCTTTCTCAAGAACAAATCTGGCAGGGGTCTTGAACCCCAACAGCATGTGTGGAGGCCCCAGAGAGGCTTACCAGAACGTTCAGTGGCAATTCTTAAAGCTTGGTTATTTGAGCATTTTCTTCATCCTTACCCCACAGACACTGATAAACACATGTTGGCTACTCAAACAGGTCTTTCTCGAAACCAGGTATCAAATTGGTTCATTAATGCTCGAGTCCGCGTTTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAGCAAGAACAACAGGTGCCAATGAGAACTCTAGTAAAAATGAGGGAACTTCTGGCAATGAAGGTGGCCAGCCTAGAGTGGATAAGCCTCTGAGCAAGTTTGGTATGTTGCATACAATACCTGAGAACCAATTTCAGGGTATGGAAGAAATGGGTTCAGCCAATGCGGAGGAACAATGGAGTCAAGAGAAGCGGTCTAAATTGGAAAGCCAAATGACTCCAAACATGGATGGGACACTAATGAGTTTTTTGCCATGCAGACATGGTGGTGGACTTGATGTTGGGGGACTTGGGTCCGTGTCACTGACATTGGGACTGAGGCATGGAGTTGAAGGTGTACAACACCACCACCAACAACAACAACTACAAGAGGAGCAGCTTAGACATCACCTTGGAGGGCAAATGATCCATGACTTTGTAGGCTGA 2427 0.433 MSRLRPESHVAQQIRRDKLRIQNGSQHLQELPNNLEQLSSQPGFNMDLLQVRNVRNANMLDEPAVYASEMPNFSTASNPLSAPRNAMEYQELGASESSRLMMHQYGSFPHSLAGLHASQKEQSELRNLENWRNSNRHDWVVNYANSSLANGSNTTSTNSFVDAYQHYGKPSYNEQFGNASGEMASRETQKQLGVIQLPPPSSPVYHQNGLQDIVKSASISAHGSNMASLMQQTGQGIWVGDASELELQPCYGNSQSNQLRFGWTNRPVDNTLRWSSSLGFTDKKVDEHNPGPLLNDSNPQSLSLSLSSNAQSKACVSQFEEGSASVDLQSGCGTSKDPQSVKYMKSIIVSRDCGKSLQDTVGIPSKTSYQNVGPLGPFTGYATILKSSRFLKTAQQLLDEFCSISGPKFAKSSDVSERVVSREVSASTSADTVTVNETGVASKGNNNNSGSSSSKFYISNENSVDWEARSSFGLSSRPDYQQKKAKLLYMQEEVSRRYKQYHQQMQMVVSSFESVVGLSSAIPYISLALKSVSKHFRCLNNSISDQLKLISEVLGEDLTVPTTSTSGKVDTNMTRLRCMDQSFLKNKSGRGLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLEARTTGANENSSKNEGTSGNEGGQPRVDKPLSKFGMLHTIPENQFQGMEEMGSANAEEQWSQEKRSKLESQMTPNMDGTLMSFLPCRHGGGLDVGGLGSVSLTLGLRHGVEGVQHHHQQQQLQEEQLRHHLGGQMIHDFVG* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00655 808 SMART HOX_1 599 663 IPR001356 GO:0003677
Rops7g00655 808 Pfam Associated with HOX 384 544 IPR006563 -
Rops7g00655 808 Gene3D - 602 664 - -
Rops7g00655 808 SMART prehox3 379 545 IPR006563 -
Rops7g00655 808 ProSiteProfiles 'Homeobox' domain profile. 596 659 IPR001356 GO:0003677
Rops7g00655 808 MobiDBLite consensus disorder prediction 670 695 - -
Rops7g00655 808 MobiDBLite consensus disorder prediction 671 688 - -
Rops7g00655 808 Pfam Homeobox KN domain 616 655 IPR008422 GO:0003677|GO:0006355
Rops7g00655 808 FunFam BEL1-like homeodomain protein 9 602 664 - -
Rops7g00655 808 CDD homeodomain 599 660 IPR001356 GO:0003677
Rops7g00655 808 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 236 681 - -
Rops7g00655 808 SUPERFAMILY Homeodomain-like 601 666 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00655 Rops-Chr7 8632712 8639675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00655 366 775 Homeobox Transcription Factor Family AT4G34610 37.002 8.43e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Rops7g00655 POX 6.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00655 - - gmx:100790583 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00655 7 8632712 8639675 Rops7g00655 7 8632712 8639675 ECH
Rops7g00655 7 8632712 8639675 Rops3g00975 3 12499785 12507059 PCT