Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00653 ATGTGTCTCTCGGTGAGGCTGCAGATTGGCACCATAGGATATGCTGCGCCAGAGTATGTTCATACTGGTAAGTTGACTGCTAAGAGTGATGTTTGGAGCTTTGGGGTAGTTCTTTATGAACTCATCACTGGGAGGAGATCTGTTGAAAGAAACCTACCAAGAAATGAACAAAAGCTTTTGGAGTGGATAAGACCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGACACCAGACTTGAGAGACAATATTGCATCAAGTCGGCTCATGAACTTGCAATCCTAGCAAACAAGTGCCTCATGAAGCAGCCAAAGTCACGTCCAAAAATGAGTGAGAGGACCTGGTAA 351 0.4359 MCLSVRLQIGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRSVERNLPRNEQKLLEWIRPYVSDPRKFHHIVDTRLERQYCIKSAHELAILANKCLMKQPKSRPKMSERTW* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00653 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00653 116 SUPERFAMILY Protein kinase-like (PK-like) 8 113 IPR011009 -
Rops7g00653 116 PANTHER OS01G0588500 PROTEIN-RELATED 9 113 - -
Rops7g00653 116 Pfam Protein kinase domain 8 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00653 116 Gene3D Transferase(Phosphotransferase) domain 1 4 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00653 Rops-Chr7 8584817 8585284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00653 9 113 Glycoside Hydrolase AT3G07070 45.714 7.79e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops7g00653 Pkinase 2.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00653 - - gmx:100305425 199.519