Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00644 ATGGCCAAGCTTAGTGTCAGAAGCAGCAGCAAAAAGAAAAGTGGTGGTGGTGGGATTGTGAAGCTTGTTGAGAAGCTCCAGAAGAGGCTCTTGTTACTTGGTTTTGAGAAATATGGAGAAGGGTGTGTGCCAGAGGATGTGAAGGAAGGACATTTTGCTGTGATTGTTGAAGGTGGAGAAGAACCAAAGAGATTCGTGCTGCCATTAAGCTGTTTAACAAATCCAAAGTTTTTGAGGCTATTGGAGCAAGCTGCAGAAGAGTATGGATTTGATCATGAAGGTGCATTAACCATTCCTTGCACACCTTGTGAGCTTGAGAGGATAGTGGCAGGAACATGCTGA 342 0.4444 MAKLSVRSSSKKKSGGGGIVKLVEKLQKRLLLLGFEKYGEGCVPEDVKEGHFAVIVEGGEEPKRFVLPLSCLTNPKFLRLLEQAAEEYGFDHEGALTIPCTPCELERIVAGTC* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00644 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 108 IPR003676 GO:0009733
Rops7g00644 113 Pfam Auxin responsive protein 42 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00644 Rops-Chr7 8436624 8436965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00644 44 100 Calmodulin-binding Proteins AT3G43120 56.140 1.76e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00644 - K14488 gmx:100794278 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00644 7 8436624 8436965 Rops7g00644 7 8436624 8436965 ECH
Rops7g00644 7 8436624 8436965 Rops3g00989 3 12711782 12713750 PCT