Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00626 ATGGGTCAGATCCAGTATTCCGAGAAGTACTTCGACGATACTCATGAGTATAGGCATGTGGTTCTGCCTCCTGAAGTGGCCAAACTGCTTCCCAAGAATCGTCTTCTCCCTGAGAATGAGTGGCGTGCGATGGGGGTTCAGCAGAGCCGTGGTTGGGTTCATTATGCAATTCATCGCCCTGAGCCACACATCATGCTTTTCAAAAGGCCTTTGAACTTTCAGCAGTAA 228 0.4912 MGQIQYSEKYFDDTHEYRHVVLPPEVAKLLPKNRLLPENEWRAMGVQQSRGWVHYAIHRPEPHIMLFKRPLNFQQ* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00626 75 SUPERFAMILY Cell cycle regulatory proteins 1 74 IPR036858 GO:0016538
Rops7g00626 75 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Rops7g00626 75 FunFam Cyclin-dependent kinases regulatory subunit 1 75 - -
Rops7g00626 75 SMART CKS_2 3 72 IPR000789 GO:0016538
Rops7g00626 75 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 75 - -
Rops7g00626 75 Gene3D - 1 75 IPR036858 GO:0016538
Rops7g00626 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Rops7g00626 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Rops7g00626 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Rops7g00626 75 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00626 Rops-Chr7 8137674 8137997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00626 1 75 Core Cell Cycle Gene Families AT2G27970 89.333 1.21e-48 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00626 K02219 - osa:4331610 156.377