Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00606 ATGGCGGAAGAACGCAATGAGGTGAGTGATTACAGTTCGGAGGACGAAGGCACTGAGGATTACAGGCGTGGAGGGTACCATGCGGTTCGGATTGGCGATACTTTCAAGAATGAGTGTTATGTGGTTCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATACTCAGAAATCGCGATATGTTGCCTTGAAAATTCAAAAGAGTGCTCAGCACTACACGGAGGCAGCGATGGATGAAATAAAGATTCTCAAACAAATTGCTGAAGGGGATCCAGAAGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAACATTCAGGGCCTAATGGTCAGCATGTTTGTATGGTTTTTGAATTTCTTGGTGATAATCTCCTCACCCTTATCAAATATAGTGATTATCGAGGGGTTCCCCTTCCCATGGTCAAAGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAACTTTCTATAATACACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTGTCTCCAATAGATCCATCTAAGGATCCTAGAAAATCTGGTGTTCCACTTATCCTTACAGAAAGCAAGGACAAGATTGTGTCCAAGAATGGGACCACAAAAGATGATAAAAGTTTGAATGGAGATCTAACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAAGCAGCTCAGGGTTGTGTTATAAAGGAAAATCCTGAGGAAGCAGAAGAGGATTCTAAAGCACCTGAGCAAGACGATTGTAGTAATGACGTGAAACTAAGTGTAGAATCTGGTGAAGGTAAACCTAATAGTCCCATGAGTAAAGATGAATTAACAAAGACTGTTGAAAGTAAGGATGTTCCACAAGGAAGTCATGGTCATAGGAGAGGTAGCTGCTCTACCAGAAAGAAGTTGCTTGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACGTATAAACAGTTCACAAGTGATATTCAGACAAGGCAGTATAGATGTCCTGAGGTCCTTCTTGGATCTAAATATTCAACTCCAGCAGATATATGGTCCTTTGCTTGCATTTTCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATTTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCTCTTAGTGGCCGCTATTCCCGGGACTTTTTCAATAGATATGGTGATTTGAGGCACATTCGACGGTTGCGTTTCTGGCCTCTTAATAAGGTGCTGAAGGAGAAGTATGATTTCAGTGAGCAAGATGCAACTGACATGGCTGACTTCCTTGTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACGGCTGCTCAGTGCCTTGCTCATCCATGGATCAGTGCAGGTCCTCGGACTCTTGAGCCCTCATTCACTAGTGTGCAACCTGATGGGGAAATGTCTGAAAAGATGAAGAGGGAAAAGGCTGAGCAAGAGGCTGTGGAAGTTGGTATGGGGAATATGGCCATTGATGGAACTCCAAAGCCACTGAAAGATTCCAAGTCTACGAAGCCATAA 1620 0.4284 MAEERNEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNECYVVQSKLGWGHFSTVWLAWDTQKSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPIDPSKDPRKSGVPLILTESKDKIVSKNGTTKDDKSLNGDLTKNQKKKMRKKAKKAAQGCVIKENPEEAEEDSKAPEQDDCSNDVKLSVESGEGKPNSPMSKDELTKTVESKDVPQGSHGHRRGSCSTRKKLLAAVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVLLGSKYSTPADIWSFACIFFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALSGRYSRDFFNRYGDLRHIRRLRFWPLNKVLKEKYDFSEQDATDMADFLVPLLDFVPEKRPTAAQCLAHPWISAGPRTLEPSFTSVQPDGEMSEKMKREKAEQEAVEVGMGNMAIDGTPKPLKDSKSTKP* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00606 539 MobiDBLite consensus disorder prediction 206 225 - -
Rops7g00606 539 MobiDBLite consensus disorder prediction 286 300 - -
Rops7g00606 539 FunFam Serine/threonine-protein kinase SRPK-like protein 311 481 - -
Rops7g00606 539 CDD STKc_SRPK 29 481 - -
Rops7g00606 539 MobiDBLite consensus disorder prediction 517 539 - -
Rops7g00606 539 Pfam Protein kinase domain 318 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00606 539 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00606 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Rops7g00606 539 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Rops7g00606 539 FunFam CMGC/SRPK protein kinase 26 125 - -
Rops7g00606 539 SMART serkin_6 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00606 539 MobiDBLite consensus disorder prediction 245 267 - -
Rops7g00606 539 MobiDBLite consensus disorder prediction 205 306 - -
Rops7g00606 539 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Rops7g00606 539 SUPERFAMILY Protein kinase-like (PK-like) 35 491 IPR011009 -
Rops7g00606 539 Gene3D Transferase(Phosphotransferase) domain 1 123 482 - -
Rops7g00606 539 ProSiteProfiles Protein kinase domain profile. 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00606 539 FunFam Ser/arg-rich protein kinase 4 123 183 - -
Rops7g00606 539 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00606 Rops-Chr7 7760352 7765066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00606 1 529 EF-hand Containing Proteins AT5G22840 69.358 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Rops7g00606 Pkinase 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00606 K08832 - gmx:100791829 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00606 7 7760352 7765066 Rops7g00606 7 7760352 7765066 ECH