Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops7g00596 | ATGGAACCACCCGTGGTTGCGAGAAAAAGAGGTCGCCCGAGGAAACAGAGAAGAGAGGATGAAATCGTGACCGTTGATCCGAAATCAGTTCTCGAATCGATGAAAACGACATCGGTAGCATTGGTTGGACGATATGTGTTGAAACAGTTCCGAAGAAGCACCGTTCTTCTCGGAAAAGTTGTAAGTTATGAAAGTGGATTATACAAAGTAACGTATGAGAATGGCGGTTGCGAGAATTTGGATAGTAGAGATGTTCGTAAGATACTTCTAGATGACAGTTATTTTGATGATGAATTGATTCAAAGGAAGAATGAATTAGAGGAATCGTTATTGCCGAAGATCATGGATGAATCAGGGAAGGGTTCGAGTGAATTGCATGGTGATTTATTGGTTAAGGAAGAGGAACGAGATGAAATGGAGGTTGATTCGTCTGGTGATTCAATGGAATCTAGTTCTGATACTGAAACTCCGTTGCCGTTACCGTTACCGCCACCATTGGTGTTACCAAAGTCTTCGGGAACTATTGGTGTGCCGGAGCAGTATGTTCAACACCTCTTTGCAGTTTATGGATTCCTACGGTCGTTTAGCACTCGATTGTTTCTGAGTCCGTTTACTTTGGATGAGTTTGTTGGCTCTCTTAACTGCCGAGTTTCAAACACATTGCTTGATGCCATTCATGTTTCCCTTATGCGTGTTTTGAGACGTCATCTTGAAAACCTTGCAGCTGAGGGTTCGCAGCATGCATCAAAATGCCTTAGGTGCAGTGATTGGAGCTTGCTTGATACCTTGACTTGGCCTGTGTTTGTGATTCAGTATTTAGTAGTTAATGGATACACAAAGGGACCTGAGTGGACAGGATTTTATGATGAGATTTTTTATGGCGAGTATTATTTATTGCCTGCAAGTAGGAAATTAATAATATTGCAAATCCTCTGCGATGATGTTTTGGATTCTGAGGAGCTAAAAGCTGAAATGAACCTACGTGAAGAATCAGAGGTTGGGATGGATTATGAAGCTGAAGATATCTTTCCTGCTGAAAATGGGCCGAGAAGAGTCCATCCAAGATATACTAAAACTACTGCTTGCAAGGACAATGAAACTATGAAGTTTGTTTCAGAATTAAGTGCTGTGAATCCACATGGTAATGCTGAGGATGGTGATGTTGATAGAAATGGAGATGAATGTCGCCTCTGTGGCATGGATGGGACCTTGCTTTGTTGTGATGGATGTCCTGCTGTTTATCATTCAAGGTGTATTGGTGTGATGAAGATGCACATACCAGAAGGGGCATGGTATTGTCCAGAGTGCAAAATTAATATGATTGGGCCAAAAATTGCACAGGGAACATCACTTAAAGGGGCTGAAATATTTGGAAGGGACTTGTATGGGCAACTTTTCATGGGTGCTTGCGACCACTTACTGGTGCTCAATGTCAACGATGGTGAATTTTGTCTTAAATACTACAATCAGAACGACGTTCCTGAAGTTCTTCAAGTGCTTTATGCATCCATGCAACATAGGCCTATATACTATGATATTTGCATGGCAATATTGCAGTATTGGAATATTCCAGAAAGCTTCTTACATCTTTGTGTTACAACTGGACCAGATATAAACTCTGCAAATACGAAGATAGATGCAAACTTCTCTGCTGCATTACCACCTCCGATGGCTGAAGAAGATCATAAAACTGATAGTTTGGAGATGGCAGGATACGGTCTAACATCCGTGAGTGGGATTTGTAGTGATAATATGGTACCATCTCTTGATTCTTCATTGGTTACCACTCAAGGCCCCGCTCATGAAAGTAGTGGCAATGCTACAACTAAGGAGTTCCCTACCGTGAATGTGAAGCTTCATGAGGAAACTGTGATGGATTCGGTTGTTTCCACTGTTAACCATCAGTGTGACGTGAACTATCAAAATTCTGTTCATAGGTCAACTGTAGTCAATCCTGCCAAGTGCTCCTTGGTAAGCAGCCAATTTAATAATTATGGGCATGCAAATGACATGGGGTTGCCTATGAATTTGTCTTTGCAAACTAAAGGGTGTGAAGCTGGTTTTGGAAAGTGCAAAGGCAGTATTTCTAATGATTTTGTGTACATGGGTTGCTCCTTTAAACCTCAGTCATACATGAATTACTATATGCATGGTCATTTTGCTGCATCCGCTGCTGCTAACTTGGCCATTCTTTCTTCAGAGGATTCTAGATCAGAGGGTCATGTGTCAGACAACCTGAGCAAAGCTACATCTGGGAACACTTATTTGCTAGCAAAGGCATTCTCACTAACAGCTTCACGCTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAATCCCTTGTTTCAAGCAAGAGAGGATGCATGTTAAATCATGCTGCTCTAAGTGCCACCAAAAGTGCTATGAAAATCCTTTCTGGTCTTGCTCCTGTAAGGAGTGGAGAGGGAATTATCCCTAGCATTGTAACATATGTTATATACATGGAGGAAAGCTTACGTGGTTTAATAGATGGACCCTTTCTAAGTGAAAACTATAGAAAGCAATGGCGTAAGCAAGTGGAACGAGCTGCAACATTTAGGGACATAAAGCCCCTTTTACTCAAACTCGAGGAGAACATTCGCACAATTGCTTTTTGTGGGGACTGGGTGAAGCTGATGGATGATTGGCTGGTCAAATTTTTTATAATCCAAAGTGCTGCATGTACTCTTGGAACAACACAGAAACGTGCACCATGTGGTCGGCGTAAAAAACAGTTATCTATCGAAGAAGTTAAAGTTGATGCTCGCCGTGAAAACTTTACCTGGTGGCCTGGTGACAAATATACCAAATCTGTATTTCAGAGAGCTGTTTTACCAAAATCCATGGTCAGAAAAGCAGCTCGCCAAGGTGGTTCGAGGAAAATTTTAGGCATTTTCTATGCTGATGGTTCTGAAATTCCTAAAAGAAGCCGACAGCTAATTTGGAGAGCTGCAGTTGAGATGTGTAGGAATGCATCACAGCTGGCACTTCAGGTCCGGTATCTAGATTCTTATATCAGATGGACTGATCTGATTCGTCCTGAGCATAACCTCCAGGACGGGAAAGGTCAGGATACTGAAGCTTCTGCTTTTAGAAATGCAAATGTTTGTGACAAAAAACATGTAGAGGGAAAATTTTTTTATGGTATAGCTTTTGGGAGCCAAAAGCATCTTCCTTCTCGGGTGATGAAAAATGTTGAAATAGAGCAAGGACCACAAGGAAAGGAGAAGTACTGGTTTTCTGAAATGCGCATTCCTTTATATTTGATAAAAGAGTATGAAGTAGGCATTAAAAAAGTGCCATGTGATAAAGAGCACTTGAATATCGCATCTCAGTTGCACAAAAGGCGGTTGAAAGCTAGCTGCAAGGACATATTTTTTTACCTCACCTGCAAGAGAGACAAATTGGACGTTTTATCATGTTCTATATGTCAGCAGGGTGTTTTATTTGGGAACGCTTTCAAGTGCAGTGCATGTCAAGGTTATTGTCATGAGGGCTGTTCCATAAATTTGACAGTCTCTACATATGAAGAAGTTGAGTTCTTGACTTCTTGCAAAAAATGTTATTATGCCAAATTACTTACTAAAAAGAGGACCAGTATTGAATCTCCAACTAGTCCCTTAATCTTACAAGGACAAGGAGATAGCTCATTAACAGTGCTGAAGGAGCCGAGGCCTAAATGTTATGATGAAGCACTGAGATCTACCAGGACAAAGGGTAGTCGTCCTGACAAGAAACAGGTTGCTTCAGATTCCAGCCGTCGCGGAAACTGTTCTTGGGGTATTATATGGAAAAAGAAGAATAGTGAAGATACAGGCATTGATTTCAGGCTCAGGAACATAATTCTAAAGGGAGGTTCAGGTTTGCCTCAATTGCAACCTGTTTGTCACTTGTGCCAGAAACCATATAGGTCTGATCTAATGTATATTTGCTGTGAAACATGCAGAAATTGGTATCACGCAGATGCTATTGAACTTGAAGAGTCCAAAATTTTTGATGTGCTGAGCTTCAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTCTGATTTCACGTGCAAGAAGGAAGAGGGCAAGAAGTCACATTCAAGGGCTTCAAAGAAAGAGCATTCTGGAGCAGACTCTGATTCTGTAATGCTTACTGACATGGGAGTATGTGAGCCTGCCACTCCTATCTTTCCCGTAGAGGATGTCTCTAGACAAGAGATTGATCCTCTGCTGTTCTCTCTTTCAAATGTCGAGCTGATTACAGAACCCAAATTAGAAACAGATATTGAGAACAATACTGTCTCTGGGCCAGGGCCTCAGAAATTACCAGTGAGAAGGCATATTAAATGTGAGGAGGACAATAATGGTGGTTCTTTTGGAGATCAACTTCTGCATGCTGAATTTTCAACACCCAATGAAATGGGTAATCTGTCCAAATCTGCAGAGGTTTCATCACCTTGTGTAGATTATGGCTCTGCTGTGCTCGCTGACACCAATCTTCTGAATGACTCTGAAATTGTAAATTATGAAAACATGGAGTTTGAACCCCATACCTACTTCTCTTTGACTGAACTGCTGCATTCTGATGATAACAGTCAATATGAGGAAGCTGATGTGTCCGGGGACTTGTCAGGATATTTAAAAGATTCTGATACATTAGGTGTTCCTGAAGAATGTGGAACTGTTAAGCTAGAAGAGTACAGCTGGGGACATGAAAATTCATTACAAGGGAGTATTTATAATTGTTTGCTATGTTCCCAAATCGAACCTGCCCCGGATCTCTTTTGTCAGGTCTGTGGGATTTGGATTCACAGCCAATGTTCACCTTGGGTTGAATCACCATCTAGGCTTGCAAATTGGAAGTGTGGTAATTGCCGGGAATGGCAATAG | 4947 | 0.4152 | MEPPVVARKRGRPRKQRREDEIVTVDPKSVLESMKTTSVALVGRYVLKQFRRSTVLLGKVVSYESGLYKVTYENGGCENLDSRDVRKILLDDSYFDDELIQRKNELEESLLPKIMDESGKGSSELHGDLLVKEEERDEMEVDSSGDSMESSSDTETPLPLPLPPPLVLPKSSGTIGVPEQYVQHLFAVYGFLRSFSTRLFLSPFTLDEFVGSLNCRVSNTLLDAIHVSLMRVLRRHLENLAAEGSQHASKCLRCSDWSLLDTLTWPVFVIQYLVVNGYTKGPEWTGFYDEIFYGEYYLLPASRKLIILQILCDDVLDSEELKAEMNLREESEVGMDYEAEDIFPAENGPRRVHPRYTKTTACKDNETMKFVSELSAVNPHGNAEDGDVDRNGDECRLCGMDGTLLCCDGCPAVYHSRCIGVMKMHIPEGAWYCPECKINMIGPKIAQGTSLKGAEIFGRDLYGQLFMGACDHLLVLNVNDGEFCLKYYNQNDVPEVLQVLYASMQHRPIYYDICMAILQYWNIPESFLHLCVTTGPDINSANTKIDANFSAALPPPMAEEDHKTDSLEMAGYGLTSVSGICSDNMVPSLDSSLVTTQGPAHESSGNATTKEFPTVNVKLHEETVMDSVVSTVNHQCDVNYQNSVHRSTVVNPAKCSLVSSQFNNYGHANDMGLPMNLSLQTKGCEAGFGKCKGSISNDFVYMGCSFKPQSYMNYYMHGHFAASAAANLAILSSEDSRSEGHVSDNLSKATSGNTYLLAKAFSLTASRFFWPSSEKKLVEVPRERCGWCLSCKSLVSSKRGCMLNHAALSATKSAMKILSGLAPVRSGEGIIPSIVTYVIYMEESLRGLIDGPFLSENYRKQWRKQVERAATFRDIKPLLLKLEENIRTIAFCGDWVKLMDDWLVKFFIIQSAACTLGTTQKRAPCGRRKKQLSIEEVKVDARRENFTWWPGDKYTKSVFQRAVLPKSMVRKAARQGGSRKILGIFYADGSEIPKRSRQLIWRAAVEMCRNASQLALQVRYLDSYIRWTDLIRPEHNLQDGKGQDTEASAFRNANVCDKKHVEGKFFYGIAFGSQKHLPSRVMKNVEIEQGPQGKEKYWFSEMRIPLYLIKEYEVGIKKVPCDKEHLNIASQLHKRRLKASCKDIFFYLTCKRDKLDVLSCSICQQGVLFGNAFKCSACQGYCHEGCSINLTVSTYEEVEFLTSCKKCYYAKLLTKKRTSIESPTSPLILQGQGDSSLTVLKEPRPKCYDEALRSTRTKGSRPDKKQVASDSSRRGNCSWGIIWKKKNSEDTGIDFRLRNIILKGGSGLPQLQPVCHLCQKPYRSDLMYICCETCRNWYHADAIELEESKIFDVLSFKCCKCRRIKSPVCPYSDFTCKKEEGKKSHSRASKKEHSGADSDSVMLTDMGVCEPATPIFPVEDVSRQEIDPLLFSLSNVELITEPKLETDIENNTVSGPGPQKLPVRRHIKCEEDNNGGSFGDQLLHAEFSTPNEMGNLSKSAEVSSPCVDYGSAVLADTNLLNDSEIVNYENMEFEPHTYFSLTELLHSDDNSQYEEADVSGDLSGYLKDSDTLGVPEECGTVKLEEYSWGHENSLQGSIYNCLLCSQIEPAPDLFCQVCGIWIHSQCSPWVESPSRLANWKCGNCREWQ* | 1649 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops7g00596 | 1648 | ProSitePatterns | Zinc finger PHD-type signature. | 395 | 436 | IPR019786 | - | |
Rops7g00596 | 1648 | SMART | PHD_3 | 1600 | 1645 | IPR001965 | - | |
Rops7g00596 | 1648 | SMART | PHD_3 | 1159 | 1208 | IPR001965 | - | |
Rops7g00596 | 1648 | SMART | PHD_3 | 1314 | 1362 | IPR001965 | - | |
Rops7g00596 | 1648 | SMART | PHD_3 | 394 | 437 | IPR001965 | - | |
Rops7g00596 | 1648 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Rops7g00596 | 1648 | ProSiteProfiles | DDT domain profile. | 179 | 239 | IPR018501 | - | |
Rops7g00596 | 1648 | SUPERFAMILY | FYVE/PHD zinc finger | 1311 | 1368 | IPR011011 | - | |
Rops7g00596 | 1648 | SMART | testlast3 | 179 | 239 | IPR018501 | - | |
Rops7g00596 | 1648 | MobiDBLite | consensus disorder prediction | 132 | 164 | - | - | |
Rops7g00596 | 1648 | Pfam | PHD-finger | 395 | 437 | IPR019787 | - | |
Rops7g00596 | 1648 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 294 | 326 | IPR028942 | - | |
Rops7g00596 | 1648 | CDD | PHD_SF | 1314 | 1361 | - | - | |
Rops7g00596 | 1648 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 386 | 441 | IPR013083 | - | |
Rops7g00596 | 1648 | ProSiteProfiles | Zinc finger PHD-type profile. | 392 | 439 | IPR019787 | - | |
Rops7g00596 | 1648 | SUPERFAMILY | FYVE/PHD zinc finger | 1588 | 1646 | IPR011011 | - | |
Rops7g00596 | 1648 | MobiDBLite | consensus disorder prediction | 1255 | 1275 | - | - | |
Rops7g00596 | 1648 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1310 | 1368 | IPR013083 | - | |
Rops7g00596 | 1648 | PANTHER | PHD FINGER FAMILY PROTEIN | 34 | 1443 | - | - | |
Rops7g00596 | 1648 | SUPERFAMILY | FYVE/PHD zinc finger | 381 | 441 | IPR011011 | - | |
Rops7g00596 | 1648 | MobiDBLite | consensus disorder prediction | 1255 | 1270 | - | - | |
Rops7g00596 | 1648 | Pfam | DDT domain | 181 | 236 | IPR018501 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops7g00596 | Rops-Chr7 | 7642915 | 7650522 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops7g00596 | 269 | 539 | EF-hand Containing Proteins | AT5G22760 | 47.766 | 1.27e-75 | 275 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Rops7g00596 | DDT | 3.7e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops7g00596 | - | - | gmx:100808614 | 2384.37 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops7g00596 | 7 | 7642915 | 7650522 | Rops7g00596 | 7 | 7642915 | 7650522 | ECH | |
Rops7g00596 | 7 | 7642915 | 7650522 | Rops3g01040 | 3 | 13613045 | 13628583 | PCT |