Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00593 ATGGCAGAAACAGCTGGGGGAAGCTTCACCCCTCATGTGGTGACAGTGAATCCTGGGGAGGATATGGTCAATACAATATCAACATTTTCTCGAACATGTCCTCGGGCTATTTGCATTCTTTCTGCTACCGGTGCTGTATCAAGTGTCCTCATTCGAAAACCTGGTTCTTTAAGTGATACTTTGAGATGTGAGGGAAACTTTGAAATTCTTTCTTTATCTGGATCATATACCTTTGGTGGTGATAATGCACATTGCAAAGAGGGCACATTGACCATTTTATTAGCTGAACCTGATGGAAAGGTTTTTGGAGGTGTCCTTGTGGGTTCATTGATAGCTGCTGCCCCTATTCAACTTATCATGGCTAGTTTCAAGCAAAACATCTGTAAGGAAATCATGAGAAGGAACTCAGCTAGATCTTCTTCTACTGCTCCAAATATGTCTAGTAATCCGGATTCAGAAAAGGTTTCCTTAAATGTTCCTAGAATGATAGAAGGCAAAACGAGTTGCCTTTCACCAACATCTGGACTTTTGCCAACAACTAATAGATTACCAGTGAATGTGATTCCTGCAACAACTACTGGAATGTCAGATATAGTCAACATTCCTGCAAATCAAAAGATGCACTCTGTTTCTGTAAATGGTGTTGGCATGGATTGCAAGGCCCGGCAACCCATCATAGACCAAAGAATTTCTACAGATGACAATGCTAGTGTCAATTTTTCTAGTGGGTAG 732 0.4112 MAETAGGSFTPHVVTVNPGEDMVNTISTFSRTCPRAICILSATGAVSSVLIRKPGSLSDTLRCEGNFEILSLSGSYTFGGDNAHCKEGTLTILLAEPDGKVFGGVLVGSLIAAAPIQLIMASFKQNICKEIMRRNSARSSSTAPNMSSNPDSEKVSLNVPRMIEGKTSCLSPTSGLLPTTNRLPVNVIPATTTGMSDIVNIPANQKMHSVSVNGVGMDCKARQPIIDQRISTDDNASVNFSSG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00593 243 Pfam Plants and Prokaryotes Conserved (PCC) domain 11 124 IPR005175 -
Rops7g00593 243 Gene3D - 11 139 - -
Rops7g00593 243 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 172 IPR039605 GO:0003680
Rops7g00593 243 MobiDBLite consensus disorder prediction 134 155 - -
Rops7g00593 243 CDD DUF296 10 123 IPR005175 -
Rops7g00593 243 SUPERFAMILY AF0104/ALDC/Ptd012-like 7 132 - -
Rops7g00593 243 ProSiteProfiles PPC domain profile profile. 6 144 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00593 Rops-Chr7 7573943 7576155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00593 4 123 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.407 5.07e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00593 - - pcin:129313760 230.335