LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops7g00564	ATGAAGCCCTGGTGTAACTGCGACATTTGCAGTAGCTACTTAACCACGAGTTGGGCCAACGAGTTTGCGAATCTCTGCGATTGGTACACTCATCTTCTCCGCAAATCACCCACCGGAACCATTCACGTGCACGTGCTTGGCAACACCATCACGTGCAACCCACAGAACGTGGAGTACATGCTCAAAACTCGTTTTGACAACTACCCAAAAGGGAAACCATTCTCCACCATCCTCGGCGATCTTTTGGGCCGAGGAATCTTCAATGTCGACGGCGATTCATGGAACTTTCAACGCAAAATGGCAAGCCTTGAACTGGGAAGCGTGGCGGTTCGTACTTACGCGCTTGAGATAATCAGAGAGGAGATTCACACGAGACTTGTTCCTTTCATGACGTCAATTACACGTGCCGAACATGACAAAATCCTCGACCTACAAGACATCCTGCGACGGTTTTCCTTCGACAACATATGCAAATTTTCTTTCGGGTGGGACCCATGTTGTCTCCAACCGGTGTTGCCATTTTCTGACTTAGCCGTCGCTTTCGACACCGCCTCGAAGCTCTCCGCCGAGCGAGCCATGGTAGCGTCGCCGGCGATATGGAAGATCAAGCGCTTCTTCAACGTTGGCTCTGAGAAGAAGCTGAAAGAAGCAATCAACGTAGTGAACAACTTAACAGAAGAGATAATAAACAAGCGTAGGGAAATTGGGTTCTCCACAAGAAGAGACCTCCTTTCAAGGTTCATGAGTTCAGTAAACGACGACAAATACCTCAGAGACATCGTCGTCAGTTTTCTTTTAGCTGGTCGTGACACGGTGGCATCAGCGTTGACATGTTTCTTTTGGTTATTATCAAACCACCCTGAGGTTGAGACTCGGATCCGTGATGAGCTGAACCGGGTGATGAACCCGGTTCAGGATTTAGCTACCTTTGAACAACTCCGTGAAATGCATTACCTAAACGCTGCCGTTTATGAAAGCTTGAGACTTTACCCACCGGTTCAGTTTGATTCCAAGTTTGCAAAAGAGGATGATATGTTACCTGATGGGACATTTGTAAGAAAGGGCACTAGGGTTTCTTACCACCCGTATGCAATGGGTCGGATGGAGCGGGTTTGGGGCTCCGATTGTCTTGAATTCAAACCTCAAAGGTGGTTGCAAAATGGTGTCTTTGTACCCGAGAATCTGTTTAAGTACCCGGTTTTTCAGGCGGGTGCTAGAATCTGTTTGGGGAAGGAATTGGCTTTGGTGGAAATAAAATCTGTTGTGGTTGCCTTGGTAGGGAAATTTGATATTCGGGTTGCTGGGGATCATTCGGAGCCCCGATTTCTCCCGGGTCTAACGGCAACAGTTCGGGGTGGATTGCCGATTCATGTTTATGAAAGACAACGCTGA	1392	0.4799	MKPWCNCDICSSYLTTSWANEFANLCDWYTHLLRKSPTGTIHVHVLGNTITCNPQNVEYMLKTRFDNYPKGKPFSTILGDLLGRGIFNVDGDSWNFQRKMASLELGSVAVRTYALEIIREEIHTRLVPFMTSITRAEHDKILDLQDILRRFSFDNICKFSFGWDPCCLQPVLPFSDLAVAFDTASKLSAERAMVASPAIWKIKRFFNVGSEKKLKEAINVVNNLTEEIINKRREIGFSTRRDLLSRFMSSVNDDKYLRDIVVSFLLAGRDTVASALTCFFWLLSNHPEVETRIRDELNRVMNPVQDLATFEQLREMHYLNAAVYESLRLYPPVQFDSKFAKEDDMLPDGTFVRKGTRVSYHPYAMGRMERVWGSDCLEFKPQRWLQNGVFVPENLFKYPVFQAGARICLGKELALVEIKSVVVALVGKFDIRVAGDHSEPRFLPGLTATVRGGLPIHVYERQR*	464

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops7g00564	463	Coils	Coil	207	234	-	-
	Rops7g00564	463	Gene3D	Cytochrome P450	13	463	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PANTHER	CYTOCHROME P450	13	454	-	-
	Rops7g00564	463	PRINTS	P450 superfamily signature	399	408	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	P450 superfamily signature	408	419	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	P450 superfamily signature	267	284	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	P450 superfamily signature	321	332	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	E-class P450 group I signature	256	273	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	E-class P450 group I signature	276	302	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops7g00564	463	PRINTS	E-class P450 group I signature	408	431	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops7g00564	Rops-Chr7	7183730	7185121	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops7g00564	4	462	Cytochrome P450	AT2G27690	62.661	0.0	605

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops7g00564	K20624		-	gmx:100813091	727.243

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